Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036780.1-P | Field mustard | nucleus | 96.83 | 96.83 |
| CDX73702 | Canola | nucleus | 93.17 | 92.49 |
| CDY07266 | Canola | cytosol, mitochondrion | 32.68 | 82.72 |
| CDY04348 | Canola | nucleus | 54.88 | 81.52 |
| CDY19552 | Canola | mitochondrion | 39.02 | 80.0 |
| AT3G51720.1 | Thale cress | nucleus | 69.02 | 69.53 |
| CDY11490 | Canola | nucleus | 39.76 | 61.51 |
| CDY58310 | Canola | nucleus | 39.76 | 61.51 |
| CDY70964 | Canola | cytosol | 25.85 | 60.92 |
| CDY07733 | Canola | cytosol | 34.63 | 42.39 |
| CDY65893 | Canola | nucleus | 48.29 | 39.92 |
| CDY70507 | Canola | cytosol, nucleus, plastid | 39.02 | 36.95 |
| CDY18389 | Canola | nucleus | 43.66 | 35.45 |
| KRH76097 | Soybean | nucleus | 45.85 | 33.63 |
| KRH65464 | Soybean | nucleus | 45.61 | 33.39 |
| KRH00407 | Soybean | nucleus | 44.15 | 31.64 |
| Solyc09g042710.2.1 | Tomato | nucleus | 44.15 | 31.59 |
| PGSC0003DMT400068339 | Potato | nucleus | 43.9 | 31.58 |
| KRG94824 | Soybean | cytosol | 36.34 | 31.17 |
| GSMUA_Achr3P09860_001 | Banana | nucleus | 31.46 | 30.94 |
| GSMUA_Achr8P21300_001 | Banana | nucleus | 32.2 | 30.84 |
| KRH40785 | Soybean | nucleus | 36.34 | 30.41 |
| CDX93176 | Canola | cytosol | 27.56 | 29.27 |
| CDY07602 | Canola | nucleus | 32.68 | 28.27 |
| CDY12396 | Canola | cytosol, endoplasmic reticulum, nucleus | 23.17 | 28.19 |
| CDY06986 | Canola | cytosol | 30.98 | 28.1 |
| Os03t0339700-01 | Rice | nucleus | 36.34 | 27.39 |
| EER92305 | Sorghum | nucleus | 36.1 | 27.16 |
| CDY24901 | Canola | cytosol | 31.22 | 27.0 |
| Zm00001d047516_P001 | Maize | nucleus | 35.85 | 26.97 |
| Os07t0677900-01 | Rice | nucleus | 33.9 | 26.78 |
| GSMUA_Achr8P02810_001 | Banana | mitochondrion | 33.17 | 25.66 |
| Zm00001d007164_P001 | Maize | nucleus | 33.9 | 25.09 |
| EER97734 | Sorghum | nucleus | 34.63 | 24.57 |
| TraesCS2A01G106600.1 | Wheat | nucleus | 35.85 | 24.34 |
| TraesCS2B01G124200.1 | Wheat | nucleus | 36.1 | 23.6 |
| TraesCS2D01G107200.1 | Wheat | nucleus | 35.61 | 23.47 |
| CDX72151 | Canola | cytosol | 23.41 | 22.75 |
| HORVU2Hr1G018380.4 | Barley | nucleus | 35.37 | 22.62 |
| TraesCS1A01G299400.1 | Wheat | cytosol | 30.0 | 22.36 |
| VIT_08s0058g01020.t01 | Wine grape | cytosol | 45.85 | 22.35 |
| Zm00001d010610_P001 | Maize | cytosol | 30.0 | 22.08 |
| TraesCS1B01G309200.1 | Wheat | cytosol | 29.02 | 21.72 |
| TraesCS1D01G298300.1 | Wheat | nucleus | 29.51 | 21.61 |
| Os05t0476100-01 | Rice | cytosol, nucleus, plastid | 29.02 | 21.02 |
| CDY27228 | Canola | cytosol | 24.39 | 20.92 |
| HORVU1Hr1G070120.3 | Barley | nucleus | 30.24 | 20.06 |
| OQU78181 | Sorghum | nucleus | 26.1 | 7.76 |
Protein Annotations
| EnsemblPlants:CDX78029 | EnsemblPlantsGene:GSBRNA2T00129307001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF4 |
| PFAM:PF05701 | ProteinID:CDX78029 | ProteinID:CDX78029.1 | SEG:seg | UniParc:UPI0004EEF6F0 | MapMan:35.1 |
Description
BnaA09g32240D
Coordinates
chrLK031814:+:710647..712291
Molecular Weight (calculated)
46459.9 Da
IEP (calculated)
9.633
GRAVY (calculated)
-0.709
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEPLCESSF VGDIDTSAPF ESVREAATRF GGFGFWKPSS LSNILEPSQN DVDEANIVAS ELEKELISKE GEALKVLKSL ETTKAIVEEL KSKLHRREDK
101: ENCDVNVLKE LNQAKTNLCK TTEDLAAIRE SVELLNKRLE EERAALEKTR ERLNSAEISK EIERLSDDAL EFSKTGEEAR FAVDKAVCEI ERTRSKIKAA
201: EMRLVAARKM KEAAKAAEAV AIAEIKDVTR RRRRTRETLQ EEILEKIEET AQEIRSSRRT IEEGLERVNS AKMEEETQWQ WSERRRRSSS YKGKYKNRRE
301: TVLMDVNGLD MMMNGDGTAS SVAVLKPTMS IGQILSRKLL LADEAAMMMN GRVSLGQILG KTNVKERSGE GKEKEKRVNG KRKRFGLAKL SVMLNKECKN
401: KKKKIVLNLK
101: ENCDVNVLKE LNQAKTNLCK TTEDLAAIRE SVELLNKRLE EERAALEKTR ERLNSAEISK EIERLSDDAL EFSKTGEEAR FAVDKAVCEI ERTRSKIKAA
201: EMRLVAARKM KEAAKAAEAV AIAEIKDVTR RRRRTRETLQ EEILEKIEET AQEIRSSRRT IEEGLERVNS AKMEEETQWQ WSERRRRSSS YKGKYKNRRE
301: TVLMDVNGLD MMMNGDGTAS SVAVLKPTMS IGQILSRKLL LADEAAMMMN GRVSLGQILG KTNVKERSGE GKEKEKRVNG KRKRFGLAKL SVMLNKECKN
401: KKKKIVLNLK
001: MAETLEPSLV GEIDTSAPFE SVREAATRFG GFGFWKPSSL NISEASQNEV GMVLKASELE KELIEKEGET LKVLKSLEST KAIVEELKSK IQNKEDKENC
101: DMNVFKELNQ AKMNLCKTTK DLAAIRVSVG LLNKRLEEER AALEKTRERL NSENAAEMSM EIQRLSYEAK EFSRTGENVR YAVNKAVAEI EQTRNKIEAA
201: EMRLIAARKM KEAARAAEAV AIAEIKAVTR RGRRRRRGGN GEETMQEEIL ETIDETAREI RSSRRTLEEG LAKMEAEEGN WWWTEQRRRS SCSAKFKNPP
301: YMMDVKGLNM MMNGDGTSSS VAVLKPTMSI GQILSRKLLL ADESAMMMNG RVSLGQILGK TNFGDREKEK RFNGKRKRFG FANLSVMLNK ESKKKNKKKK
401: IALNLSC
101: DMNVFKELNQ AKMNLCKTTK DLAAIRVSVG LLNKRLEEER AALEKTRERL NSENAAEMSM EIQRLSYEAK EFSRTGENVR YAVNKAVAEI EQTRNKIEAA
201: EMRLIAARKM KEAARAAEAV AIAEIKAVTR RGRRRRRGGN GEETMQEEIL ETIDETAREI RSSRRTLEEG LAKMEAEEGN WWWTEQRRRS SCSAKFKNPP
301: YMMDVKGLNM MMNGDGTSSS VAVLKPTMSI GQILSRKLLL ADESAMMMNG RVSLGQILGK TNFGDREKEK RFNGKRKRFG FANLSVMLNK ESKKKNKKKK
401: IALNLSC
Arabidopsis Description
WEB family protein At3g51720 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCT6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.