Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- endoplasmic reticulum 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07266 | Canola | cytosol, mitochondrion | 16.91 | 35.19 |
| CDY04348 | Canola | nucleus | 24.04 | 29.35 |
| CDY11490 | Canola | nucleus | 22.26 | 28.3 |
| CDY58310 | Canola | nucleus | 22.26 | 28.3 |
| CDX73702 | Canola | nucleus | 29.08 | 23.73 |
| CDX78029 | Canola | nucleus | 28.19 | 23.17 |
| AT3G51720.1 | Thale cress | nucleus | 25.22 | 20.88 |
| CDY19552 | Canola | mitochondrion | 11.87 | 20.0 |
| CDY07733 | Canola | cytosol | 18.1 | 18.21 |
| CDY70507 | Canola | cytosol, nucleus, plastid | 20.18 | 15.7 |
| CDY65893 | Canola | nucleus | 21.66 | 14.72 |
| CDX93176 | Canola | cytosol | 16.62 | 14.51 |
| CDY70964 | Canola | cytosol | 7.42 | 14.37 |
| CDY18389 | Canola | nucleus | 20.47 | 13.66 |
| CDX72151 | Canola | cytosol | 16.32 | 13.03 |
| CDY06986 | Canola | cytosol | 17.21 | 12.83 |
| KRH65464 | Soybean | nucleus | 21.07 | 12.68 |
| CDY07602 | Canola | nucleus | 17.21 | 12.24 |
| KRH40785 | Soybean | nucleus | 17.51 | 12.04 |
| CDY24901 | Canola | cytosol | 16.91 | 12.03 |
| KRH76097 | Soybean | nucleus | 19.88 | 11.99 |
| PGSC0003DMT400068339 | Potato | nucleus | 20.18 | 11.93 |
| KRG94824 | Soybean | cytosol | 16.91 | 11.92 |
| Solyc09g042710.2.1 | Tomato | nucleus | 20.18 | 11.87 |
| KRH00407 | Soybean | nucleus | 19.88 | 11.71 |
| Zm00001d007164_P001 | Maize | nucleus | 18.99 | 11.55 |
| Os07t0677900-01 | Rice | nucleus | 17.51 | 11.37 |
| Zm00001d047516_P001 | Maize | nucleus | 17.8 | 11.01 |
| CDY27228 | Canola | cytosol | 15.43 | 10.88 |
| Os03t0339700-01 | Rice | nucleus | 17.21 | 10.66 |
| EER92305 | Sorghum | nucleus | 16.91 | 10.46 |
| TraesCS2A01G106600.1 | Wheat | nucleus | 18.4 | 10.26 |
| TraesCS1B01G309200.1 | Wheat | cytosol | 16.62 | 10.22 |
| TraesCS1A01G299400.1 | Wheat | cytosol | 16.62 | 10.18 |
| TraesCS1D01G298300.1 | Wheat | nucleus | 16.91 | 10.18 |
| GSMUA_Achr8P02810_001 | Banana | mitochondrion | 15.73 | 10.0 |
| EER97734 | Sorghum | nucleus | 16.91 | 9.86 |
| TraesCS2D01G107200.1 | Wheat | nucleus | 18.1 | 9.81 |
| TraesCS2B01G124200.1 | Wheat | nucleus | 18.1 | 9.73 |
| HORVU2Hr1G018380.4 | Barley | nucleus | 18.4 | 9.67 |
| GSMUA_Achr3P09860_001 | Banana | nucleus | 11.87 | 9.59 |
| GSMUA_Achr8P21300_001 | Banana | nucleus | 12.17 | 9.58 |
| Os05t0476100-01 | Rice | cytosol, nucleus, plastid | 16.02 | 9.54 |
| HORVU1Hr1G070120.3 | Barley | nucleus | 17.21 | 9.39 |
| Zm00001d010610_P001 | Maize | cytosol | 15.13 | 9.16 |
| VIT_08s0058g01020.t01 | Wine grape | cytosol | 20.77 | 8.32 |
| OQU78181 | Sorghum | nucleus | 13.95 | 3.41 |
Protein Annotations
| EnsemblPlants:CDY12396 | EnsemblPlantsGene:GSBRNA2T00061630001 | Gene3D:3.40.1020.10 | InterPro:IPR038110 | InterPro:TD_ACT-like_sf | InterPro:Web |
| KEGG:00260+4.3.1.19 | KEGG:00290+4.3.1.19 | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF4 | PFAM:PF05701 |
| ProteinID:CDY12396 | ProteinID:CDY12396.1 | SEG:seg | SUPFAM:SSF55021 | UniParc:UPI0004EF479C | UniProt:A0A078FGR0 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC08g08090DBnaC08g08090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGR0]
Coordinates
chrLK032021:+:727267..729519
Molecular Weight (calculated)
38004.9 Da
IEP (calculated)
7.888
GRAVY (calculated)
-0.285
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIFEVISKV LPSDLKSVGV LPDCCDSGRS GMLKAVGLCV LICSYWIQSQ REIKESLIRS PTNNPKKKYV PCFIWSCNDI KTLYLAHQAK DYVGLKRNLL
101: YCTVLENLTT SDLVKDHLRY LMGGRSSVEE EVLCKFTFPE RPGALMNFLD SFSPRFSFVG DIDTSAPFES VREAATRFGG FGFWKPSSLN NIPKHLSLES
201: TKAIVEELKS KLHGKEDNEN CDMNVLKELN QAKTNLCKTT VDLAAISVFE IERTRSKIKA AEMRLVAARK MKEAARVAEA VAIAEIKYVT RSSRTRETLH
301: EEILEKIEET AQEIRSSKRT IEEGLERVNS AKMEAEE
101: YCTVLENLTT SDLVKDHLRY LMGGRSSVEE EVLCKFTFPE RPGALMNFLD SFSPRFSFVG DIDTSAPFES VREAATRFGG FGFWKPSSLN NIPKHLSLES
201: TKAIVEELKS KLHGKEDNEN CDMNVLKELN QAKTNLCKTT VDLAAISVFE IERTRSKIKA AEMRLVAARK MKEAARVAEA VAIAEIKYVT RSSRTRETLH
301: EEILEKIEET AQEIRSSKRT IEEGLERVNS AKMEAEE
001: MAETLEPSLV GEIDTSAPFE SVREAATRFG GFGFWKPSSL NISEASQNEV GMVLKASELE KELIEKEGET LKVLKSLEST KAIVEELKSK IQNKEDKENC
101: DMNVFKELNQ AKMNLCKTTK DLAAIRVSVG LLNKRLEEER AALEKTRERL NSENAAEMSM EIQRLSYEAK EFSRTGENVR YAVNKAVAEI EQTRNKIEAA
201: EMRLIAARKM KEAARAAEAV AIAEIKAVTR RGRRRRRGGN GEETMQEEIL ETIDETAREI RSSRRTLEEG LAKMEAEEGN WWWTEQRRRS SCSAKFKNPP
301: YMMDVKGLNM MMNGDGTSSS VAVLKPTMSI GQILSRKLLL ADESAMMMNG RVSLGQILGK TNFGDREKEK RFNGKRKRFG FANLSVMLNK ESKKKNKKKK
401: IALNLSC
101: DMNVFKELNQ AKMNLCKTTK DLAAIRVSVG LLNKRLEEER AALEKTRERL NSENAAEMSM EIQRLSYEAK EFSRTGENVR YAVNKAVAEI EQTRNKIEAA
201: EMRLIAARKM KEAARAAEAV AIAEIKAVTR RGRRRRRGGN GEETMQEEIL ETIDETAREI RSSRRTLEEG LAKMEAEEGN WWWTEQRRRS SCSAKFKNPP
301: YMMDVKGLNM MMNGDGTSSS VAVLKPTMSI GQILSRKLLL ADESAMMMNG RVSLGQILGK TNFGDREKEK RFNGKRKRFG FANLSVMLNK ESKKKNKKKK
401: IALNLSC
Arabidopsis Description
WEB family protein At3g51720 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCT6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.