Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58310 | Canola | nucleus | 100.0 | 100.0 |
| CDY07266 | Canola | cytosol, mitochondrion | 49.06 | 80.25 |
| Bra007760.1-P | Field mustard | nucleus | 84.53 | 69.78 |
| CDY04348 | Canola | nucleus | 57.74 | 55.43 |
| CDY70964 | Canola | cytosol | 35.09 | 53.45 |
| CDX73702 | Canola | nucleus | 63.02 | 40.44 |
| CDX78029 | Canola | nucleus | 61.51 | 39.76 |
| AT3G51720.1 | Thale cress | nucleus | 44.53 | 28.99 |
| CDY07733 | Canola | cytosol | 30.57 | 24.18 |
| CDY12396 | Canola | cytosol, endoplasmic reticulum, nucleus | 28.3 | 22.26 |
| CDY70507 | Canola | cytosol, nucleus, plastid | 31.32 | 19.17 |
| KRG94824 | Soybean | cytosol | 31.7 | 17.57 |
| CDY65893 | Canola | nucleus | 32.45 | 17.34 |
| KRH65464 | Soybean | nucleus | 35.09 | 16.61 |
| KRH40785 | Soybean | nucleus | 30.19 | 16.33 |
| CDY18389 | Canola | nucleus | 30.94 | 16.24 |
| KRH76097 | Soybean | nucleus | 33.96 | 16.1 |
| PGSC0003DMT400068339 | Potato | nucleus | 33.21 | 15.44 |
| Solyc09g042710.2.1 | Tomato | nucleus | 33.21 | 15.36 |
| CDY19552 | Canola | mitochondrion | 11.32 | 15.0 |
| KRH00407 | Soybean | nucleus | 31.7 | 14.69 |
| GSMUA_Achr3P09860_001 | Banana | nucleus | 21.89 | 13.91 |
| Os07t0677900-01 | Rice | nucleus | 27.17 | 13.87 |
| Zm00001d047516_P001 | Maize | nucleus | 27.55 | 13.39 |
| Zm00001d007164_P001 | Maize | nucleus | 27.92 | 13.36 |
| GSMUA_Achr8P21300_001 | Banana | nucleus | 21.51 | 13.32 |
| Os03t0339700-01 | Rice | nucleus | 27.17 | 13.24 |
| EER92305 | Sorghum | nucleus | 27.17 | 13.21 |
| TraesCS2A01G106600.1 | Wheat | nucleus | 29.81 | 13.08 |
| EER97734 | Sorghum | nucleus | 27.92 | 12.8 |
| CDX72151 | Canola | cytosol | 20.38 | 12.8 |
| CDY07602 | Canola | nucleus | 22.64 | 12.66 |
| TraesCS1A01G299400.1 | Wheat | cytosol | 26.04 | 12.55 |
| GSMUA_Achr8P02810_001 | Banana | mitochondrion | 24.91 | 12.45 |
| TraesCS2B01G124200.1 | Wheat | nucleus | 29.43 | 12.44 |
| TraesCS2D01G107200.1 | Wheat | nucleus | 29.06 | 12.38 |
| CDY24901 | Canola | cytosol | 21.89 | 12.24 |
| TraesCS1B01G309200.1 | Wheat | cytosol | 25.28 | 12.23 |
| TraesCS1D01G298300.1 | Wheat | nucleus | 25.66 | 12.14 |
| Zm00001d010610_P001 | Maize | cytosol | 25.28 | 12.03 |
| Os05t0476100-01 | Rice | cytosol, nucleus, plastid | 25.66 | 12.01 |
| HORVU2Hr1G018380.4 | Barley | nucleus | 29.06 | 12.01 |
| CDX93176 | Canola | cytosol | 17.36 | 11.92 |
| CDY06986 | Canola | cytosol | 20.0 | 11.73 |
| CDY27228 | Canola | cytosol | 21.13 | 11.72 |
| HORVU1Hr1G070120.3 | Barley | nucleus | 25.66 | 11.0 |
| VIT_08s0058g01020.t01 | Wine grape | cytosol | 33.58 | 10.58 |
| OQU78181 | Sorghum | nucleus | 23.77 | 4.57 |
Protein Annotations
| EnsemblPlants:CDY11490 | EnsemblPlantsGene:GSBRNA2T00049568001 | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF4 | ProteinID:CDY11490 | ProteinID:CDY11490.1 |
| ProteinID:CDY58310.1 | SEG:seg | UniParc:UPI0004EF434A | UniProt:A0A078J5P1 | MapMan:35.1 | : |
Description
BnaA09g40560DBnaA02g16410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5P1]
Coordinates
chrLK032011:-:671289..673258
Molecular Weight (calculated)
30352.6 Da
IEP (calculated)
10.252
GRAVY (calculated)
-0.711
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFQERRNVV NLCVKLRSMV TELADCIRIR SVARSHVRDC DSGTVRNFLE DDRHGVGRVG PSIQGHWRNK ECDLMSWRES NTRTRSNIKA VCEIERTRSN
101: IKAAEMRLVT AMKMKEAARA AEAVAIAEIK DVTRRRRTRK MLQEEIPEKI EETAQEIKSN RRTIEEGLET VNSAKMKAGE EETQWQWSER RRRSSSYKGK
201: YKNRRETVLM DENGLDMMMN GDGTASSVTV LKPATSIGQI LSRKVLLADE SAMMMNGRVS LGQIL
101: IKAAEMRLVT AMKMKEAARA AEAVAIAEIK DVTRRRRTRK MLQEEIPEKI EETAQEIKSN RRTIEEGLET VNSAKMKAGE EETQWQWSER RRRSSSYKGK
201: YKNRRETVLM DENGLDMMMN GDGTASSVTV LKPATSIGQI LSRKVLLADE SAMMMNGRVS LGQIL
001: MAETLEPSLV GEIDTSAPFE SVREAATRFG GFGFWKPSSL NISEASQNEV GMVLKASELE KELIEKEGET LKVLKSLEST KAIVEELKSK IQNKEDKENC
101: DMNVFKELNQ AKMNLCKTTK DLAAIRVSVG LLNKRLEEER AALEKTRERL NSENAAEMSM EIQRLSYEAK EFSRTGENVR YAVNKAVAEI EQTRNKIEAA
201: EMRLIAARKM KEAARAAEAV AIAEIKAVTR RGRRRRRGGN GEETMQEEIL ETIDETAREI RSSRRTLEEG LAKMEAEEGN WWWTEQRRRS SCSAKFKNPP
301: YMMDVKGLNM MMNGDGTSSS VAVLKPTMSI GQILSRKLLL ADESAMMMNG RVSLGQILGK TNFGDREKEK RFNGKRKRFG FANLSVMLNK ESKKKNKKKK
401: IALNLSC
101: DMNVFKELNQ AKMNLCKTTK DLAAIRVSVG LLNKRLEEER AALEKTRERL NSENAAEMSM EIQRLSYEAK EFSRTGENVR YAVNKAVAEI EQTRNKIEAA
201: EMRLIAARKM KEAARAAEAV AIAEIKAVTR RGRRRRRGGN GEETMQEEIL ETIDETAREI RSSRRTLEEG LAKMEAEEGN WWWTEQRRRS SCSAKFKNPP
301: YMMDVKGLNM MMNGDGTSSS VAVLKPTMSI GQILSRKLLL ADESAMMMNG RVSLGQILGK TNFGDREKEK RFNGKRKRFG FANLSVMLNK ESKKKNKKKK
401: IALNLSC
Arabidopsis Description
WEB family protein At3g51720 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCT6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.