CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07733	Canola	cytosol	55.85	82.69
CDY70507	Canola	cytosol, nucleus, plastid	55.04	63.05
AT2G38370.2	Thale cress	nucleus	64.72	59.55
CDY18389	Canola	nucleus	59.68	58.61
CDX78029	Canola	nucleus	39.92	48.29
CDX73702	Canola	nucleus	40.12	48.18
CDY19552	Canola	mitochondrion	19.35	48.0
CDY04348	Canola	nucleus	25.2	45.29
CDY07266	Canola	cytosol, mitochondrion	14.52	44.44
KRH76097	Soybean	nucleus	45.16	40.07
KRH65464	Soybean	nucleus	44.76	39.64
PGSC0003DMT400068339	Potato	nucleus	42.74	37.19
Solyc09g042710.2.1	Tomato	nucleus	42.74	37.0
KRG94824	Soybean	cytosol	35.48	36.82
KRH40785	Soybean	nucleus	35.48	35.92
GSMUA_Achr3P09860_001	Banana	nucleus	29.84	35.49
KRH00407	Soybean	nucleus	40.93	35.49
GSMUA_Achr8P21300_001	Banana	nucleus	29.03	33.64
CDY58310	Canola	nucleus	17.34	32.45
CDY11490	Canola	nucleus	17.34	32.45
Os03t0339700-01	Rice	nucleus	34.88	31.8
CDX93176	Canola	cytosol	24.6	31.61
Zm00001d047516_P001	Maize	nucleus	33.87	30.83
EER92305	Sorghum	nucleus	33.27	30.28
CDY24901	Canola	cytosol	28.63	29.96
Zm00001d007164_P001	Maize	nucleus	33.27	29.78
Os07t0677900-01	Rice	nucleus	30.85	29.48
CDY07602	Canola	nucleus	28.02	29.32
EER97734	Sorghum	nucleus	33.87	29.07
CDY06986	Canola	cytosol	26.41	28.98
CDY70964	Canola	cytosol	9.88	28.16
GSMUA_Achr8P02810_001	Banana	mitochondrion	29.64	27.74
TraesCS1B01G309200.1	Wheat	cytosol	30.44	27.55
TraesCS1A01G299400.1	Wheat	cytosol	30.04	27.09
TraesCS2A01G106600.1	Wheat	nucleus	32.66	26.82
TraesCS1D01G298300.1	Wheat	nucleus	30.24	26.79
Os05t0476100-01	Rice	cytosol, nucleus, plastid	30.24	26.5
TraesCS2B01G124200.1	Wheat	nucleus	33.47	26.48
TraesCS2D01G107200.1	Wheat	nucleus	32.86	26.21
HORVU2Hr1G018380.4	Barley	nucleus	33.67	26.05
Zm00001d010610_P001	Maize	cytosol	29.03	25.85
VIT_08s0058g01020.t01	Wine grape	cytosol	42.74	25.21
HORVU1Hr1G070120.3	Barley	nucleus	30.85	24.76
CDX72151	Canola	cytosol	20.56	24.17
CDY12396	Canola	cytosol, endoplasmic reticulum, nucleus	14.72	21.66
CDY27228	Canola	cytosol	20.77	21.55
OQU78181	Sorghum	nucleus	25.4	9.14

Protein Annotations

EnsemblPlants:CDY65893	EnsemblPlantsGene:GSBRNA2T00050958001	InterPro:Web	ncoils:Coil	PANTHER:PTHR32054	PANTHER:PTHR32054:SF4
PFAM:PF05701	ProteinID:CDY65893	ProteinID:CDY65893.1	SEG:seg	UniParc:UPI0004EE3D43	UniProt:A0A078JE63
MapMan:35.1	:	:	:	:	:

Description

BnaCnng48980DBnaCnng48980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JE63]

Coordinates

chrLK034990:-:462..2285

Molecular Weight (calculated)

55157.1 Da

IEP (calculated)

10.075

GRAVY (calculated)

-0.697

Length

496 amino acids

Sequence
(BLAST)

001: MAESPEPVSV TEPGSLNPDS DLPSNGRVEI DTSTQFESVR EAANRFGGFG FWRPTHNYKP QGAFQENVEG DIIRLKAQAA ELQNDLIAKE GETLEVVKEL
101: EETKATVKEL NLKLHQKNEK ELLREEVNGC FKPAGAVLKD LSKAKMNLCK RTVDLAGIRE SVEVLNKKLQ EEKAALEKTR ERLMQKSLKA VKGETGENDA
201: FVMMNEVRRL SSEAQEFKKT GENAGLEIVK AMAAIEDTRE KIKTAKIRLV AARKMKEAAR AAEAVAIAEI KAVTVTTEDA EEEERKRVEE AVSRVEEANV
301: SKMYTLKKVD KAAQEVETSK KAMEEAVERV DTTNAAKLEA EAALRNRQSE KGQRRRLSSS VNNTAKFKSR RETTTTTPKT TRLMDVNGLH LTYDDVAVGS
401: SSSVPVLKPT MSIGQILSRK LLVAEDSDVM NVASERKKMS LGQMLAKSSS GDETWSKKSE GKENGKRSVT RKRFAKIAML LKKESKNKKK IALKLR

Best Arabidopsis Sequence Match ( AT2G38370.1 )
(BLAST)

001: MAEFPEPGTV NPDSDLSNGR AEKPEIDTSA PFESVREAAT RFGGFGFWRP SLNKLPDASQ ENIQEPDIMG LKAQAFELQR ELIVKERETL EVLKELEATK
101: ATVLKLQQRN EAYEEDTLRE EVDSHIKPAG VVLKDLSQAK MNLCKIASIR ESVEQLKNKL NEERAALEKT RERLMEKSLK VFSLEEEEVR VRFAKEGQTG
201: EKDLGMLNEV QRLSRQAQEV KKTGENAELE VVKAMAETES TRDKIRTAKI RLVAARKMKE AAREAEAVAI AEIEAVTGSM NVGKAEAVTI SAEEYSVLAR
301: SARDAEEEAR KRVEDAMSRV EEANVSKKDV LKKVDEAAQE IETSKRVLEE AVERVDAANA SKIEAEEALR KWRSENGQRR RLSSSVNNTS KFKSRRETTT
401: RLMDVNGLHL TYDVVDGSSS SSTVPVLKPT MSIGQILSKK LLLAEDSDMN VANERRKMSL GQMLAKNSSS DKTVSKRSEG KENEKRTKTR KRKSFGFAKI
501: SVLLNKESKN KKKKKKIALN LR

Arabidopsis Description

Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.