Factsheet for PGSC0003DMT400068339

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g042710.2.1	Tomato	nucleus	94.39	93.89
KRH76097	Soybean	nucleus	57.19	58.32
KRH65464	Soybean	nucleus	55.96	56.96
KRG94824	Soybean	cytosol	44.91	53.56
KRH40785	Soybean	nucleus	45.61	53.06
KRH00407	Soybean	nucleus	53.16	52.97
CDY70507	Canola	cytosol, nucleus, plastid	34.56	45.5
GSMUA_Achr8P21300_001	Banana	nucleus	34.04	45.33
AT2G38370.2	Thale cress	nucleus	42.46	44.9
GSMUA_Achr3P09860_001	Banana	nucleus	32.81	44.84
CDY07733	Canola	cytosol	26.32	44.78
CDY19552	Canola	mitochondrion	15.61	44.5
AT3G51720.1	Thale cress	nucleus	31.4	43.98
CDX78029	Canola	nucleus	31.58	43.9
Bra017122.1-P	Field mustard	nucleus	38.77	43.59
Bra036780.1-P	Field mustard	nucleus	31.23	43.41
CDY18389	Canola	nucleus	38.42	43.37
CDX73702	Canola	nucleus	31.4	43.34
CDY65893	Canola	nucleus	37.19	42.74
Os03t0339700-01	Rice	nucleus	40.53	42.46
CDY04348	Canola	nucleus	20.35	42.03
Bra000057.1-P	Field mustard	nucleus	35.79	41.8
CDY07266	Canola	cytosol, mitochondrion	11.75	41.36
EER92305	Sorghum	nucleus	39.47	41.28
Os07t0677900-01	Rice	nucleus	37.54	41.23
VIT_08s0058g01020.t01	Wine grape	cytosol	58.6	39.71
Zm00001d047516_P001	Maize	nucleus	37.54	39.27
Zm00001d007164_P001	Maize	nucleus	37.54	38.63
PGSC0003DMT400074781	Potato	nucleus	33.16	37.95
EER97734	Sorghum	nucleus	38.07	37.54
TraesCS2A01G106600.1	Wheat	nucleus	38.95	36.76
GSMUA_Achr8P02810_001	Banana	mitochondrion	33.51	36.04
TraesCS2D01G107200.1	Wheat	nucleus	38.07	34.89
HORVU2Hr1G018380.4	Barley	nucleus	39.12	34.79
TraesCS2B01G124200.1	Wheat	nucleus	38.25	34.77
TraesCS1B01G309200.1	Wheat	cytosol	32.28	33.58
Os05t0476100-01	Rice	cytosol, nucleus, plastid	33.16	33.39
CDY11490	Canola	nucleus	15.44	33.21
CDY58310	Canola	nucleus	15.44	33.21
TraesCS1A01G299400.1	Wheat	cytosol	31.75	32.91
TraesCS1D01G298300.1	Wheat	nucleus	31.75	32.32
Zm00001d010610_P001	Maize	cytosol	31.58	32.32
CDY70964	Canola	cytosol	9.3	30.46
HORVU1Hr1G070120.3	Barley	nucleus	31.58	29.13
Bra007760.1-P	Field mustard	nucleus	15.44	27.41
Bra039972.1-P	Field mustard	cytosol	10.53	24.0
CDY12396	Canola	cytosol, endoplasmic reticulum, nucleus	11.93	20.18
OQU78181	Sorghum	nucleus	28.25	11.68

Protein Annotations

EnsemblPlants:PGSC0003DMT400068339	EnsemblPlantsGene:PGSC0003DMG400026574	InterPro:Web	ncoils:Coil	PANTHER:PTHR32054	PANTHER:PTHR32054:SF4
PFAM:PF05701	PGSC:PGSC0003DMG400026574	SEG:seg	UniParc:UPI0002958A7B	UniProt:M1CIW4	MapMan:35.1

Description

Myosin heavy chain [Source:PGSC_GENE;Acc:PGSC0003DMG400026574]

Coordinates

chr9:+:13301708..13304824

Molecular Weight (calculated)

63379.4 Da

IEP (calculated)

8.007

GRAVY (calculated)

-0.656

Length

570 amino acids

Sequence
(BLAST)

001: MDASEMDSVI LVEKKENACV KAEIDTSAPF ESVKEAATRF GGIGFWKPTL HKSFGDSSQV AEEKFDIAKV EEQAVQLEKD LIVKERETLE VLKELESTKV
101: LIEELKSKLQ KEAYEVNATL GVDAEVKDAH LADESADKEN SEKVVSNNQD TTGGLDQCPS SAPGLILLEL KQAKLNLTRT TSDLADIRTT VESYNKKIEK
201: ERILLEKTRQ RLSSSSSKIS SLEEELNKTK EKLELVKHAE GGGPCDPVDL TRELQRLTAE TEQFKKVGEA AKSEVLRAMS EIEHTKTRIK TAEIRLVAAK
301: KMKAAARAAE AVALAEIKAL SSSENSFATL RRRPEEGVTL TFEEYSSLLS KAQDAQEASK QREVDAMMLV DEADVSKTEI LKKVEEATEE VKVSKKALEE
401: ALSRVEAANE GKLVVEEALR KWRSENGQRR RSVQNSSKFK NPSSSQHRKD SVLVDVNGLT LVNDELKPVL KTTLSIGQIL NKKLLLTEEF ENGFRAGKKA
501: GKRTVSLAQM LGKPTGELQS SRKDEKENGL EHHLPTKRKK FGFAKISHLV TQHSKKKKQH TASLRCRSAE

Best Arabidopsis Sequence Match ( AT2G38370.1 )
(BLAST)

001: MAEFPEPGTV NPDSDLSNGR AEKPEIDTSA PFESVREAAT RFGGFGFWRP SLNKLPDASQ ENIQEPDIMG LKAQAFELQR ELIVKERETL EVLKELEATK
101: ATVLKLQQRN EAYEEDTLRE EVDSHIKPAG VVLKDLSQAK MNLCKIASIR ESVEQLKNKL NEERAALEKT RERLMEKSLK VFSLEEEEVR VRFAKEGQTG
201: EKDLGMLNEV QRLSRQAQEV KKTGENAELE VVKAMAETES TRDKIRTAKI RLVAARKMKE AAREAEAVAI AEIEAVTGSM NVGKAEAVTI SAEEYSVLAR
301: SARDAEEEAR KRVEDAMSRV EEANVSKKDV LKKVDEAAQE IETSKRVLEE AVERVDAANA SKIEAEEALR KWRSENGQRR RLSSSVNNTS KFKSRRETTT
401: RLMDVNGLHL TYDVVDGSSS SSTVPVLKPT MSIGQILSKK LLLAEDSDMN VANERRKMSL GQMLAKNSSS DKTVSKRSEG KENEKRTKTR KRKSFGFAKI
501: SVLLNKESKN KKKKKKIALN LR

Arabidopsis Description

Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.