CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017122.1-P	Field mustard	nucleus	85.15	84.81
CDY70507	Canola	cytosol, nucleus, plastid	71.29	83.14
CDY07733	Canola	cytosol	42.38	63.88
CDY65893	Canola	nucleus	58.61	59.68
AT2G38370.2	Thale cress	nucleus	61.98	58.07
CDX73702	Canola	nucleus	36.04	44.07
CDX78029	Canola	nucleus	35.45	43.66
CDY19552	Canola	mitochondrion	16.24	41.0
KRH76097	Soybean	nucleus	45.15	40.79
CDY07266	Canola	cytosol, mitochondrion	12.87	40.12
CDY04348	Canola	nucleus	21.78	39.86
KRH65464	Soybean	nucleus	43.56	39.29
PGSC0003DMT400068339	Potato	nucleus	43.37	38.42
KRH40785	Soybean	nucleus	36.83	37.96
Solyc09g042710.2.1	Tomato	nucleus	42.77	37.7
KRG94824	Soybean	cytosol	34.65	36.61
KRH00407	Soybean	nucleus	40.2	35.49
GSMUA_Achr3P09860_001	Banana	nucleus	27.13	32.85
EER92305	Sorghum	nucleus	35.45	32.84
Os03t0339700-01	Rice	nucleus	34.85	32.35
Zm00001d047516_P001	Maize	nucleus	34.65	32.11
GSMUA_Achr8P21300_001	Banana	nucleus	26.73	31.54
Os07t0677900-01	Rice	nucleus	32.08	31.21
CDY11490	Canola	nucleus	16.24	30.94
CDY58310	Canola	nucleus	16.24	30.94
Zm00001d007164_P001	Maize	nucleus	33.86	30.87
EER97734	Sorghum	nucleus	34.65	30.28
TraesCS1B01G309200.1	Wheat	cytosol	31.88	29.38
TraesCS1D01G298300.1	Wheat	nucleus	32.28	29.11
TraesCS1A01G299400.1	Wheat	cytosol	31.68	29.09
TraesCS2A01G106600.1	Wheat	nucleus	34.65	28.97
Os05t0476100-01	Rice	cytosol, nucleus, plastid	32.28	28.8
CDX93176	Canola	cytosol	21.98	28.76
CDY24901	Canola	cytosol	26.53	28.27
Zm00001d010610_P001	Maize	cytosol	31.09	28.19
CDY07602	Canola	nucleus	26.34	28.06
TraesCS2D01G107200.1	Wheat	nucleus	34.46	27.97
HORVU2Hr1G018380.4	Barley	nucleus	35.25	27.77
TraesCS2B01G124200.1	Wheat	nucleus	34.46	27.75
GSMUA_Achr8P02810_001	Banana	mitochondrion	28.71	27.36
CDY70964	Canola	cytosol	9.31	27.01
CDY06986	Canola	cytosol	23.56	26.33
HORVU1Hr1G070120.3	Barley	nucleus	31.29	25.57
VIT_08s0058g01020.t01	Wine grape	cytosol	42.38	25.45
CDX72151	Canola	cytosol	18.22	21.8
CDY12396	Canola	cytosol, endoplasmic reticulum, nucleus	13.66	20.47
CDY27228	Canola	cytosol	19.01	20.08
OQU78181	Sorghum	nucleus	27.33	10.01

Protein Annotations

EnsemblPlants:CDY18389	EnsemblPlantsGene:GSBRNA2T00005377001	InterPro:Web	ncoils:Coil	PANTHER:PTHR32054	PANTHER:PTHR32054:SF4
PFAM:PF05701	ProteinID:CDY18389	ProteinID:CDY18389.1	SEG:seg	UniParc:UPI0004EE0C92	UniProt:A0A078FYX2
MapMan:35.1	:	:	:	:	:

Description

BnaA04g21980DBnaA04g21980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYX2]

Coordinates

chrLK032085:+:179918..181719

Molecular Weight (calculated)

56235.5 Da

IEP (calculated)

9.704

GRAVY (calculated)

-0.676

Length

505 amino acids

Sequence
(BLAST)

001: MAEPSPSGSA IEPRSINPHS NPSLTANVRA EIDTSSPFVS VREAANRFGG FGFWRPHSSE PLQDNVKEGE LQNYLMVKEC ETLEVMKELE LAKARIINLN
101: SKLQQKKNAS LTEEVQSHIK PAGVVLQDLN KAKMNLCKRT VDLSCLRRSV EVLSKQLKEE KDALEKTRER VMHKSLKVIS LEEEEEAKKG ETSEKDLENN
201: ALIMINEVRR LGCEAQEFKK AGEKAVEEIK HTREKVKTVE IKLVAARRMK EAARAAEAVA VAEIKAVKGS ENTVTISAEE YAKLSLDARE AEEEARKRVE
301: DAMSRVEEAN VSEMDTLKRV DEAAQEVEAS KKALEEAVER ADAANARKLE AEEALRDLKS EKGQRRRSSV NNTAKFKTRR ETITTNSLMD VNGLHLTYDF
401: VPGPSSSSVP VLKPAMSIGQ ILSKKLLVAD DSDMSVVKER CKMSLGQMLA KNSNGDGALS KKSEGKENEK RSVKRKNIGF AKIVLLLNKE SKNKKKSKKI
501: GLNLR

Best Arabidopsis Sequence Match ( AT2G38370.2 )
(BLAST)

001: MVVKTGFPIT DSSSSASMAE FPEPGTVNPD SDLSNGRAEK PEIDTSAPFE SVREAATRFG GFGFWRPSLN KLPDASQENI QEPDIMGLKA QAFELQRELI
101: VKERETLEVL KELEATKATV LKLQQRNEAY EEDTLREEVD SHIKPAGVVL KDLSQAKMNL CKIASIRESV EQLKNKLNEE RAALEKTRER LMEKSLKVFS
201: LEEEEVRVRF AKEGQTGEKD LGMLNEVQRL SRQAQEVKKT GENAELEVVK AMAETESTRD KIRTAKIRLV AARKMKEAAR EAEAVAIAEI EAVTGSMNVG
301: KAEAVTISAE EYSVLARSAR DAEEEARKRV EDAMSRVEEA NVSKKDVLKK VDEAAQEIET SKRVLEEAVE RVDAANASKI EAEEALRKWR SENGQRRRLS
401: SSVNNTSKFK SRRETTTRLM DVNGLHLTYD VVDGSSSSST VPVLKPTMSI GQILSKKLLL AEDSDMNVAN ERRKMSLGQM LAKNSSSDKT VSKRSEGKEN
501: EKRTKTRKRK SFGFAKISVL LNKESKNKKK KKKIALNLR

Arabidopsis Description

Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.