Factsheet for Os03t0339700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os02t0744700-01
Os03t0319300-01
Os03t0586600-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os06t0229800-01
Os07t0463100-01
Os07t0687200-02
Os08t0426000-00
Os10t0437600-00
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56270.1	Os03t0586600-01	AT2G04630.1	21798944
AT3G56270.1	Os07t0463100-01	AT2G04630.1	21798944
AT3G56270.1	Os08t0426000-00	AT2G04630.1	21798944
AT3G56270.1	Os01t0267900-01	AT2G41090.1	17360592
AT3G56270.1	Os01t0279300-01	AT2G41090.1	17360592
AT3G56270.1	Os01t0810300-01	AT2G41090.1	17360592
AT3G56270.1	Os03t0319300-01	AT2G41090.1	17360592
AT3G56270.1	Os05t0491000-01	AT2G41090.1	17360592
AT3G56270.1	Os05t0491100-01	AT2G41090.1	17360592
AT3G56270.1	Os07t0687200-02	AT2G41090.1	17360592
AT3G56270.1	Os12t0603800-00	AT2G41090.1	17360592
AT3G56270.1	Os01t0267900-01	AT2G41100.1	17360592
AT3G56270.1	Os01t0279300-01	AT2G41100.1	17360592
AT3G56270.1	Os01t0810300-01	AT2G41100.1	17360592
AT3G56270.1	Os03t0319300-01	AT2G41100.1	17360592
AT3G56270.1	Os05t0491000-01	AT2G41100.1	17360592
AT3G56270.1	Os05t0491100-01	AT2G41100.1	17360592
AT3G56270.1	Os07t0687200-02	AT2G41100.1	17360592
AT3G56270.1	Os12t0603800-00	AT2G41100.1	17360592
AT3G56270.1	Os02t0744700-01	AT3G01180.1	21798944
AT3G56270.1	Os06t0229800-01	AT3G01180.1	21798944
AT3G56270.1	Os10t0437600-00	AT3G01180.1	21798944
AT3G56270.1	Os03t0743500-02	AT4G14640.1	17360592
AT3G56270.1	Os01t0267900-01	AT5G21274.1	17360592
AT3G56270.1	Os01t0279300-01	AT5G21274.1	17360592
AT3G56270.1	Os01t0810300-01	AT5G21274.1	17360592
AT3G56270.1	Os03t0319300-01	AT5G21274.1	17360592
AT3G56270.1	Os05t0491000-01	AT5G21274.1	17360592
AT3G56270.1	Os05t0491100-01	AT5G21274.1	17360592
AT3G56270.1	Os07t0687200-02	AT5G21274.1	17360592
AT3G56270.1	Os12t0603800-00	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92305	Sorghum	nucleus	71.51	71.38
Zm00001d047516_P001	Maize	nucleus	68.75	68.62
Os07t0677900-01	Rice	nucleus	57.9	60.69
GSMUA_Achr8P21300_001	Banana	nucleus	39.71	50.47
GSMUA_Achr3P09860_001	Banana	nucleus	36.03	47.0
KRH76097	Soybean	nucleus	47.06	45.8
KRH65464	Soybean	nucleus	46.88	45.54
KRH00407	Soybean	nucleus	43.01	40.91
PGSC0003DMT400068339	Potato	nucleus	42.46	40.53
KRG94824	Soybean	cytosol	35.48	40.38
Solyc09g042710.2.1	Tomato	nucleus	42.28	40.14
KRH40785	Soybean	nucleus	35.29	39.18
AT3G51720.1	Thale cress	nucleus	28.68	38.33
Bra036780.1-P	Field mustard	nucleus	27.39	36.34
CDX78029	Canola	nucleus	27.39	36.34
CDX73702	Canola	nucleus	27.57	36.32
CDY70507	Canola	cytosol, nucleus, plastid	28.86	36.26
AT2G38370.2	Thale cress	nucleus	35.66	35.99
Bra017122.1-P	Field mustard	nucleus	33.09	35.5
CDY65893	Canola	nucleus	31.8	34.88
CDY18389	Canola	nucleus	32.35	34.85
CDX93176	Canola	cytosol	24.63	34.72
CDY07733	Canola	cytosol	21.14	34.33
Bra000057.1-P	Field mustard	nucleus	30.33	33.81
VIT_13s0067g02400.t01	Wine grape	nucleus	33.09	33.71
Os05t0476100-01	Rice	cytosol, nucleus, plastid	34.74	33.39
PGSC0003DMT400074781	Potato	nucleus	29.96	32.73
Solyc06g050350.2.1	Tomato	nucleus	31.07	32.56
CDY06986	Canola	cytosol	26.47	31.86
Bra016990.1-P	Field mustard	cytosol	26.47	31.86
KRH31225	Soybean	cytosol	32.72	31.79
KRG97647	Soybean	plastid	32.35	31.43
CDY07266	Canola	cytosol, mitochondrion	9.19	30.86
CDY04348	Canola	nucleus	15.44	30.43
CDY24901	Canola	cytosol	26.47	30.38
CDY07602	Canola	nucleus	26.29	30.17
Bra000190.1-P	Field mustard	nucleus	26.29	30.17
CDY19552	Canola	mitochondrion	11.03	30.0
VIT_08s0058g01020.t01	Wine grape	cytosol	45.96	29.73
KRH73215	Soybean	cytosol	30.33	29.68
AT2G40480.1	Thale cress	cytosol	27.21	28.57
KRH14870	Soybean	nucleus	30.7	28.45
AT3G56270.1	Thale cress	cytosol	22.79	27.8
CDY58310	Canola	nucleus	13.24	27.17
CDY11490	Canola	nucleus	13.24	27.17
CDX72151	Canola	cytosol	20.59	26.54
CDY70964	Canola	cytosol	7.54	23.56
Bra007760.1-P	Field mustard	nucleus	13.79	23.36
Bra007233.1-P	Field mustard	cytosol	20.22	23.01
CDY27228	Canola	cytosol	20.04	22.8
CDY12396	Canola	cytosol, endoplasmic reticulum, nucleus	10.66	17.21
Bra039972.1-P	Field mustard	cytosol	7.9	17.2

Protein Annotations

MapMan:35.1	EntrezGene:4332784	ProteinID:ABF95845.1	ProteinID:BAF11975.1	ProteinID:BAS84112.1	ncoils:Coil
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150
GO:GO:0009903	GO:GO:0009904	GO:GO:0009987	GO:GO:0016043	EnsemblPlantsGene:Os03g0339700	EnsemblPlants:Os03t0339700-01
PFAM:PF05701	PANTHER:PTHR32054	PANTHER:PTHR32054:SF4	UniProt:Q10LQ3	UniParc:UPI0000DB4622	InterPro:Web
RefSeq:XP_015629010.1	SEG:seg	:	:	:	:

Description

Protein of unknown function DUF827, plant family protein. (Os03t0339700-01)

Coordinates

chr3:+:12627357..12630298

Molecular Weight (calculated)

59792.9 Da

IEP (calculated)

5.454

GRAVY (calculated)

-0.616

Length

544 amino acids

Sequence
(BLAST)

001: MASAEAECAA AAVGGGGRAE IDTSAPFESV REAVDRFGGS AAWSSHLIRR MFAPPNPKEQ SEESKQPVDI KEQAAQLEHD LIIKEKETLD VLKELESTKK
101: IIADLKQRIQ KESNETSPSA VKSDDQSEIP ITESEEQKPE NVNIDMDMEG LDEHPQPLSG SVLLELEQAK ANLNRTTGDL AAVRAAIELL HNSIAKEKLL
201: LERSREKLSS NTALASSLED ELDQTTQKLQ TLKDLQARRE DPSDIFIEIK KMASEVQQLR GMANASKSEA MMLAAEIEQT KASIGTAEIR CIAAKKMEEA
301: ARAAEALALA EIKALLSSES SSECGSSVCD GVTLSAEEYF TLCSKAQEAD ENSRKKVEEA MLQVDVANSS ETDSVKKLDD ARLEVEECKR ALQEALKRVE
401: AANRGKLAVD EILRRWKSEN GHKRRSIGGS PKFKNAAQRR KDSHSMDIIS DASTNSCKQT LSIGQILSMK LMGPEGYDKT IWDDKTSEMP NVSLGQILNR
501: GRVLSREETA VRKRVSGKRK KFALTGLSVL LAKQAKNKKK RESL

Best Arabidopsis Sequence Match ( AT2G38370.2 )
(BLAST)

001: MVVKTGFPIT DSSSSASMAE FPEPGTVNPD SDLSNGRAEK PEIDTSAPFE SVREAATRFG GFGFWRPSLN KLPDASQENI QEPDIMGLKA QAFELQRELI
101: VKERETLEVL KELEATKATV LKLQQRNEAY EEDTLREEVD SHIKPAGVVL KDLSQAKMNL CKIASIRESV EQLKNKLNEE RAALEKTRER LMEKSLKVFS
201: LEEEEVRVRF AKEGQTGEKD LGMLNEVQRL SRQAQEVKKT GENAELEVVK AMAETESTRD KIRTAKIRLV AARKMKEAAR EAEAVAIAEI EAVTGSMNVG
301: KAEAVTISAE EYSVLARSAR DAEEEARKRV EDAMSRVEEA NVSKKDVLKK VDEAAQEIET SKRVLEEAVE RVDAANASKI EAEEALRKWR SENGQRRRLS
401: SSVNNTSKFK SRRETTTRLM DVNGLHLTYD VVDGSSSSST VPVLKPTMSI GQILSKKLLL AEDSDMNVAN ERRKMSLGQM LAKNSSSDKT VSKRSEGKEN
501: EKRTKTRKRK SFGFAKISVL LNKESKNKKK KKKIALNLR

Arabidopsis Description

Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.