Factsheet for Bra016990.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06986	Canola	cytosol	99.78	99.78
Bra000190.1-P	Field mustard	nucleus	65.27	62.24
AT2G40480.1	Thale cress	cytosol	67.48	58.88
Bra007233.1-P	Field mustard	cytosol	40.27	38.08
KRH31225	Soybean	cytosol	45.58	36.79
KRH73215	Soybean	cytosol	44.03	35.79
KRG97647	Soybean	plastid	43.36	35.0
KRH14870	Soybean	nucleus	43.81	33.73
VIT_13s0067g02400.t01	Wine grape	nucleus	39.38	33.33
Bra036780.1-P	Field mustard	nucleus	27.65	30.49
GSMUA_Achr3P09860_001	Banana	nucleus	27.88	30.22
PGSC0003DMT400074781	Potato	nucleus	31.64	28.71
Solyc06g050350.2.1	Tomato	nucleus	32.3	28.13
GSMUA_Achr8P21300_001	Banana	nucleus	26.55	28.04
Os03t0339700-01	Rice	nucleus	31.86	26.47
Bra000057.1-P	Field mustard	nucleus	28.1	26.02
EER92305	Sorghum	nucleus	30.97	25.69
Zm00001d047516_P001	Maize	nucleus	29.65	24.59
Os07t0677900-01	Rice	nucleus	27.88	24.28
EER97734	Sorghum	nucleus	30.53	23.88
Bra017122.1-P	Field mustard	nucleus	26.77	23.87
Zm00001d007164_P001	Maize	nucleus	28.98	23.65
TraesCS2A01G106600.1	Wheat	nucleus	30.53	22.85
GSMUA_Achr8P02810_001	Banana	mitochondrion	25.66	21.89
TraesCS2B01G124200.1	Wheat	nucleus	30.09	21.69
TraesCS2D01G107200.1	Wheat	nucleus	29.65	21.54
HORVU2Hr1G018380.4	Barley	nucleus	29.87	21.06
Os05t0476100-01	Rice	cytosol, nucleus, plastid	23.89	19.08
TraesCS1A01G299400.1	Wheat	cytosol	22.12	18.18
TraesCS1B01G309200.1	Wheat	cytosol	21.9	18.07
TraesCS1D01G298300.1	Wheat	nucleus	22.12	17.86
Zm00001d010610_P001	Maize	cytosol	21.24	17.24
Bra007760.1-P	Field mustard	nucleus	11.95	16.82
HORVU1Hr1G070120.3	Barley	nucleus	22.57	16.5
Bra039972.1-P	Field mustard	cytosol	6.64	12.0
OQU78181	Sorghum	nucleus	19.69	6.46

Protein Annotations

EnsemblPlants:Bra016990.1	EnsemblPlants:Bra016990.1-P	EnsemblPlantsGene:Bra016990	InterPro:Web	ncoils:Coil	PANTHER:PTHR32054
PANTHER:PTHR32054:SF13	PFAM:PF05701	SEG:seg	UniParc:UPI000254510D	UniProt:M4DKG1	MapMan:35.1

Description

AT2G40480 (E=1e-079) | unknown protein

Coordinates

chrA04:+:17237681..17239832

Molecular Weight (calculated)

51577.4 Da

IEP (calculated)

6.403

GRAVY (calculated)

-0.814

Length

452 amino acids

Sequence
(BLAST)

001: MAEEEHLNPV GVSQVPGIRR VGLRAEIDTS LPFGSVQEEV TRLGGRGYWV PFKLEDNYNG VGEFDIKRME EHAAELEKDL IVKELETLDV LEALGTTKRI
101: VEDLKRQLHQ ESLRSSAEQI KEMNNDGHSN HNPISPSPDL ILTELKQAKI NLGKTMDDLV MIQSSVESLN KKMKEEKKFL DNAREKLTYG FGGEVVSLAE
201: TPREQVKIDA EPTEETCLKQ QNKNCLRTAE MRLVAARKME EAAKAAEELA MAEITMLSSS AAYGESEEEE EDEFCFPEPP RSPFRTPRGF GNDHESRRGM
301: ILKKLEEATE GVREGKQALE DALNRVEIAN EKQLAAETAF RGWSKHSSPP MNQPQRSFFS HLNKPVVKSN VSLRDVLRRK QVPKEDDVHK RQSLEGETPR
401: RHVNLSQMLK ELKQDVKEEV REEKRFVTQR RKFGFIHITL PMHKQSKKKS SL

Best Arabidopsis Sequence Match ( AT2G40480.1 )
(BLAST)

001: MALAEEQHQN YHVAEAIPGT PGIHDVRIQP GSENSGFCVD PVGVSNVPGI RRVGLRAEID TSPPFGSVQE AVTRFGGRGY WVPFKLDDTF NGEFDIKRME
101: EHAAELEKDL IVKELETLDV LEALGSTKRI VEDLKRQLQQ EALRCSDQLS SDIKEMNDEH CHHNPMSSPD LILMELKQAK MNLGKTMDNL VVIQSSVESL
201: NKKMKEEKDF LEKTRAKLTY GFGGPVSLAE ELSRIKVKPQ VQDEPLREQV KMVAEADETG LNLQNKNSLR TAEMRLVAAR KMEEAAKAAE ALAIAEITML
301: SSNGESQDDD SEFCFPEPPR SPVTPRGLRI DNDFSTDKSS RRGILKKLEE ATEGVKQSKQ ALEAALNRVE IANVKQLAAE NAFRGWTKDS LKGDNFTPLN
401: HTRRSFFSHL NKHHEPLDIL PKPVLKSNIS MRDVLRRKQV PKEDVVAPQR QSLEGQIPRR NVNLSQMLKE LKQDVKFSAR GEKEEVHEEK QYVTQRRKFG
501: FIHITLPLQK QSKKKSSL

Arabidopsis Description

WEB family protein At2g40480 [Source:UniProtKB/Swiss-Prot;Acc:Q5XVC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.