Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07602 | Canola | nucleus | 100.0 | 100.0 |
| Bra016990.1-P | Field mustard | cytosol | 62.24 | 65.27 |
| AT2G40480.1 | Thale cress | cytosol | 66.88 | 61.2 |
| Bra007233.1-P | Field mustard | cytosol | 39.87 | 39.54 |
| KRH31225 | Soybean | cytosol | 43.04 | 36.43 |
| KRH73215 | Soybean | cytosol | 42.19 | 35.97 |
| KRG97647 | Soybean | plastid | 42.41 | 35.89 |
| VIT_13s0067g02400.t01 | Wine grape | nucleus | 40.3 | 35.77 |
| KRH14870 | Soybean | nucleus | 41.56 | 33.56 |
| Bra036780.1-P | Field mustard | nucleus | 27.85 | 32.2 |
| GSMUA_Achr3P09860_001 | Banana | nucleus | 25.95 | 29.5 |
| PGSC0003DMT400074781 | Potato | nucleus | 30.17 | 28.71 |
| GSMUA_Achr8P21300_001 | Banana | nucleus | 25.74 | 28.5 |
| Solyc06g050350.2.1 | Tomato | nucleus | 30.38 | 27.75 |
| Bra000057.1-P | Field mustard | nucleus | 28.27 | 27.46 |
| Bra017122.1-P | Field mustard | nucleus | 28.9 | 27.02 |
| Os03t0339700-01 | Rice | nucleus | 30.17 | 26.29 |
| Os07t0677900-01 | Rice | nucleus | 28.69 | 26.2 |
| EER92305 | Sorghum | nucleus | 29.54 | 25.69 |
| Zm00001d007164_P001 | Maize | nucleus | 29.32 | 25.09 |
| EER97734 | Sorghum | nucleus | 30.38 | 24.91 |
| Zm00001d047516_P001 | Maize | nucleus | 28.06 | 24.4 |
| GSMUA_Achr8P02810_001 | Banana | mitochondrion | 27.22 | 24.34 |
| TraesCS2A01G106600.1 | Wheat | nucleus | 31.01 | 24.34 |
| HORVU2Hr1G018380.4 | Barley | nucleus | 31.22 | 23.09 |
| TraesCS2B01G124200.1 | Wheat | nucleus | 30.38 | 22.97 |
| TraesCS2D01G107200.1 | Wheat | nucleus | 29.32 | 22.35 |
| Os05t0476100-01 | Rice | cytosol, nucleus, plastid | 26.16 | 21.91 |
| TraesCS1B01G309200.1 | Wheat | cytosol | 24.68 | 21.35 |
| TraesCS1A01G299400.1 | Wheat | cytosol | 24.05 | 20.73 |
| TraesCS1D01G298300.1 | Wheat | nucleus | 24.47 | 20.71 |
| Zm00001d010610_P001 | Maize | cytosol | 23.0 | 19.57 |
| HORVU1Hr1G070120.3 | Barley | nucleus | 24.89 | 19.09 |
| Bra007760.1-P | Field mustard | nucleus | 12.24 | 18.07 |
| Bra039972.1-P | Field mustard | cytosol | 6.96 | 13.2 |
| OQU78181 | Sorghum | nucleus | 19.83 | 6.82 |
Protein Annotations
Description
AT2G40480 (E=4e-168) | unknown protein
Coordinates
chrA03:+:9800081..9801790
Molecular Weight (calculated)
53893.2 Da
IEP (calculated)
9.303
GRAVY (calculated)
-0.742
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEEEHQSCV HDVNIRTKSE NFDPAGVSHA PGIRKVSSRA EIDTSPPFGS VQEAVTWFGG RGHWVPFKLQ DNYNCVGEFN IKKMEEHAAE LEKNLIVKEL
101: ETLDVLEALG STKRIVEDLK RQLHQESLRS AEYLSSDIKE MNNEHCNHNP TSSPDLILME LKQAKINLSK TMDDLAMIQS SVESLNKKMK EEKEFLDKTR
201: EKLTYGFGGA VSLAEELSRV RVKPDATPRE HVKMIAETGL NQQNKNCLRT AEMRLVAARK MEEAARAAEA LAIAEIAMLS SSQSNDESEF WFPEPPSSPL
301: TPRGLRNVTD SLRSGVLKKL EEAAQGVKQS KQDLEAALNR VEIANVKQLA AENAFRGWTK HTPTSQTRRS FFRHLNKQNE PVLKSNVSMR DVLRRKQVPK
401: EEAVVSERQS IEGQRRNVNL SQMLRELKHD IKSSVRGEKE EVREEKQFVT QRRKFGFIHI TLPMQKQSKK KTSV
101: ETLDVLEALG STKRIVEDLK RQLHQESLRS AEYLSSDIKE MNNEHCNHNP TSSPDLILME LKQAKINLSK TMDDLAMIQS SVESLNKKMK EEKEFLDKTR
201: EKLTYGFGGA VSLAEELSRV RVKPDATPRE HVKMIAETGL NQQNKNCLRT AEMRLVAARK MEEAARAAEA LAIAEIAMLS SSQSNDESEF WFPEPPSSPL
301: TPRGLRNVTD SLRSGVLKKL EEAAQGVKQS KQDLEAALNR VEIANVKQLA AENAFRGWTK HTPTSQTRRS FFRHLNKQNE PVLKSNVSMR DVLRRKQVPK
401: EEAVVSERQS IEGQRRNVNL SQMLRELKHD IKSSVRGEKE EVREEKQFVT QRRKFGFIHI TLPMQKQSKK KTSV
001: MALAEEQHQN YHVAEAIPGT PGIHDVRIQP GSENSGFCVD PVGVSNVPGI RRVGLRAEID TSPPFGSVQE AVTRFGGRGY WVPFKLDDTF NGEFDIKRME
101: EHAAELEKDL IVKELETLDV LEALGSTKRI VEDLKRQLQQ EALRCSDQLS SDIKEMNDEH CHHNPMSSPD LILMELKQAK MNLGKTMDNL VVIQSSVESL
201: NKKMKEEKDF LEKTRAKLTY GFGGPVSLAE ELSRIKVKPQ VQDEPLREQV KMVAEADETG LNLQNKNSLR TAEMRLVAAR KMEEAAKAAE ALAIAEITML
301: SSNGESQDDD SEFCFPEPPR SPVTPRGLRI DNDFSTDKSS RRGILKKLEE ATEGVKQSKQ ALEAALNRVE IANVKQLAAE NAFRGWTKDS LKGDNFTPLN
401: HTRRSFFSHL NKHHEPLDIL PKPVLKSNIS MRDVLRRKQV PKEDVVAPQR QSLEGQIPRR NVNLSQMLKE LKQDVKFSAR GEKEEVHEEK QYVTQRRKFG
501: FIHITLPLQK QSKKKSSL
101: EHAAELEKDL IVKELETLDV LEALGSTKRI VEDLKRQLQQ EALRCSDQLS SDIKEMNDEH CHHNPMSSPD LILMELKQAK MNLGKTMDNL VVIQSSVESL
201: NKKMKEEKDF LEKTRAKLTY GFGGPVSLAE ELSRIKVKPQ VQDEPLREQV KMVAEADETG LNLQNKNSLR TAEMRLVAAR KMEEAAKAAE ALAIAEITML
301: SSNGESQDDD SEFCFPEPPR SPVTPRGLRI DNDFSTDKSS RRGILKKLEE ATEGVKQSKQ ALEAALNRVE IANVKQLAAE NAFRGWTKDS LKGDNFTPLN
401: HTRRSFFSHL NKHHEPLDIL PKPVLKSNIS MRDVLRRKQV PKEDVVAPQR QSLEGQIPRR NVNLSQMLKE LKQDVKFSAR GEKEEVHEEK QYVTQRRKFG
501: FIHITLPLQK QSKKKSSL
Arabidopsis Description
WEB family protein At2g40480 [Source:UniProtKB/Swiss-Prot;Acc:Q5XVC7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.