Factsheet for Bra007760.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11490	Canola	nucleus	69.78	84.53
CDY58310	Canola	nucleus	69.78	84.53
Bra036780.1-P	Field mustard	nucleus	48.6	38.05
Bra039972.1-P	Field mustard	cytosol	27.73	35.6
AT3G51720.1	Thale cress	nucleus	36.45	28.75
KRG94824	Soybean	cytosol	25.86	17.36
Bra000057.1-P	Field mustard	nucleus	25.86	17.01
KRH65464	Soybean	nucleus	28.97	16.61
KRH76097	Soybean	nucleus	28.35	16.28
KRH40785	Soybean	nucleus	24.3	15.92
Bra017122.1-P	Field mustard	nucleus	24.61	15.58
PGSC0003DMT400068339	Potato	nucleus	27.41	15.44
Solyc09g042710.2.1	Tomato	nucleus	27.41	15.36
KRH00407	Soybean	nucleus	26.17	14.69
Zm00001d007164_P001	Maize	nucleus	24.3	14.08
Os07t0677900-01	Rice	nucleus	22.74	14.07
Os03t0339700-01	Rice	nucleus	23.36	13.79
GSMUA_Achr8P21300_001	Banana	nucleus	18.38	13.79
EER97734	Sorghum	nucleus	24.3	13.49
GSMUA_Achr3P09860_001	Banana	nucleus	17.45	13.43
Zm00001d047516_P001	Maize	nucleus	22.74	13.39
EER92305	Sorghum	nucleus	22.74	13.39
TraesCS2A01G106600.1	Wheat	nucleus	24.3	12.91
TraesCS2B01G124200.1	Wheat	nucleus	24.61	12.6
TraesCS1A01G299400.1	Wheat	cytosol	21.5	12.55
TraesCS2D01G107200.1	Wheat	nucleus	24.3	12.54
GSMUA_Achr8P02810_001	Banana	mitochondrion	20.56	12.45
TraesCS1B01G309200.1	Wheat	cytosol	21.18	12.41
Os05t0476100-01	Rice	cytosol, nucleus, plastid	21.81	12.37
HORVU2Hr1G018380.4	Barley	nucleus	24.61	12.32
TraesCS1D01G298300.1	Wheat	nucleus	21.5	12.32
Bra000190.1-P	Field mustard	nucleus	18.07	12.24
Bra007233.1-P	Field mustard	cytosol	18.07	12.13
Bra016990.1-P	Field mustard	cytosol	16.82	11.95
Zm00001d010610_P001	Maize	cytosol	20.56	11.85
HORVU1Hr1G070120.3	Barley	nucleus	21.5	11.16
VIT_08s0058g01020.t01	Wine grape	cytosol	28.04	10.7
OQU78181	Sorghum	nucleus	19.0	4.43

Protein Annotations

EnsemblPlants:Bra007760.1	EnsemblPlants:Bra007760.1-P	EnsemblPlantsGene:Bra007760	PANTHER:PTHR32054	PANTHER:PTHR32054:SF4	SEG:seg
UniParc:UPI0002542C25	UniProt:M4CU66	MapMan:35.1	:	:	:

Description

AT3G51720 (E=1e-035) | unknown protein

Coordinates

chrA09:-:30761463..30765308

Molecular Weight (calculated)

36539.7 Da

IEP (calculated)

10.559

GRAVY (calculated)

-0.821

Length

321 amino acids

Sequence
(BLAST)

001: MEELGRALKL PTGHETPRKR RLVEKEERSS RSSPRLKIPV ESSSNWSSPG FHSGWRCRKE SRLHTDQVSV STESHVSVVY LKVTTKAVAR SHVRDCDSGT
101: VRNFLEDDRH GVGRVGPSIQ GHWRNKECDL MSWRESNTRT RSNIKAVCEI ERTRSNIKAA EMRLVTAMKM KEAARAADAV AIAEIKDVTR RRRTRKMLQE
201: EIPEKIEETA QEIKSNRRTI EEGLETVNSA KMKAGEEETQ WQWSERRRRS SSYKGKYKNR RETVLMDENG LDMMMNGDGT ASSVTVLKPA TSIGQILSRK
301: VLLADESAIM MNGRVSLGQI L

Best Arabidopsis Sequence Match ( AT3G51720.1 )
(BLAST)

001: MAETLEPSLV GEIDTSAPFE SVREAATRFG GFGFWKPSSL NISEASQNEV GMVLKASELE KELIEKEGET LKVLKSLEST KAIVEELKSK IQNKEDKENC
101: DMNVFKELNQ AKMNLCKTTK DLAAIRVSVG LLNKRLEEER AALEKTRERL NSENAAEMSM EIQRLSYEAK EFSRTGENVR YAVNKAVAEI EQTRNKIEAA
201: EMRLIAARKM KEAARAAEAV AIAEIKAVTR RGRRRRRGGN GEETMQEEIL ETIDETAREI RSSRRTLEEG LAKMEAEEGN WWWTEQRRRS SCSAKFKNPP
301: YMMDVKGLNM MMNGDGTSSS VAVLKPTMSI GQILSRKLLL ADESAMMMNG RVSLGQILGK TNFGDREKEK RFNGKRKRFG FANLSVMLNK ESKKKNKKKK
401: IALNLSC

Arabidopsis Description

WEB family protein At3g51720 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCT6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.