Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRG97647 | Soybean | plastid | 82.86 | 82.86 |
KRH73215 | Soybean | cytosol | 58.93 | 59.35 |
KRH14870 | Soybean | nucleus | 58.21 | 55.54 |
CDX93176 | Canola | cytosol | 33.21 | 48.19 |
CDY06986 | Canola | cytosol | 36.96 | 45.8 |
Bra016990.1-P | Field mustard | cytosol | 36.79 | 45.58 |
CDY24901 | Canola | cytosol | 36.61 | 43.25 |
Bra000190.1-P | Field mustard | nucleus | 36.43 | 43.04 |
CDY07602 | Canola | nucleus | 36.43 | 43.04 |
AT2G40480.1 | Thale cress | cytosol | 39.11 | 42.28 |
VIT_13s0067g02400.t01 | Wine grape | nucleus | 38.75 | 40.64 |
AT3G56270.1 | Thale cress | cytosol | 30.71 | 38.56 |
KRH76097 | Soybean | nucleus | 37.5 | 37.57 |
KRH65464 | Soybean | nucleus | 37.5 | 37.5 |
PGSC0003DMT400074781 | Potato | nucleus | 32.86 | 36.95 |
Solyc06g050350.2.1 | Tomato | nucleus | 33.75 | 36.42 |
GSMUA_Achr8P21300_001 | Banana | nucleus | 27.32 | 35.75 |
KRG94824 | Soybean | cytosol | 30.18 | 35.36 |
CDX72151 | Canola | cytosol | 26.43 | 35.07 |
KRH00407 | Soybean | nucleus | 35.54 | 34.79 |
GSMUA_Achr3P09860_001 | Banana | nucleus | 25.54 | 34.29 |
Os03t0339700-01 | Rice | nucleus | 31.79 | 32.72 |
KRH40785 | Soybean | nucleus | 28.39 | 32.45 |
GSMUA_Achr8P02810_001 | Banana | mitochondrion | 30.18 | 31.89 |
EER92305 | Sorghum | nucleus | 30.18 | 31.01 |
Bra007233.1-P | Field mustard | cytosol | 26.43 | 30.96 |
Os07t0677900-01 | Rice | nucleus | 28.57 | 30.83 |
Zm00001d007164_P001 | Maize | nucleus | 30.18 | 30.51 |
CDY27228 | Canola | cytosol | 25.89 | 30.33 |
EER97734 | Sorghum | nucleus | 31.25 | 30.28 |
Zm00001d047516_P001 | Maize | nucleus | 28.75 | 29.54 |
TraesCS2A01G106600.1 | Wheat | nucleus | 31.07 | 28.81 |
TraesCS2B01G124200.1 | Wheat | nucleus | 31.07 | 27.75 |
TraesCS2D01G107200.1 | Wheat | nucleus | 30.36 | 27.33 |
HORVU2Hr1G018380.4 | Barley | nucleus | 31.25 | 27.3 |
TraesCS1B01G309200.1 | Wheat | cytosol | 25.0 | 25.55 |
Os05t0476100-01 | Rice | cytosol, nucleus, plastid | 25.71 | 25.44 |
Zm00001d010610_P001 | Maize | cytosol | 25.18 | 25.31 |
TraesCS1A01G299400.1 | Wheat | cytosol | 24.82 | 25.27 |
TraesCS1D01G298300.1 | Wheat | nucleus | 25.0 | 25.0 |
HORVU1Hr1G070120.3 | Barley | nucleus | 25.54 | 23.14 |
OQU78181 | Sorghum | nucleus | 21.07 | 8.56 |
Protein Annotations
EntrezGene:100818214 | MapMan:35.1 | EMBL:ACUP02007129 | ncoils:Coil | EnsemblPlantsGene:GLYMA_11G235600 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 | GO:GO:0009903 |
GO:GO:0009904 | GO:GO:0009987 | GO:GO:0016043 | UniProt:K7LRT1 | EnsemblPlants:KRH31225 | ProteinID:KRH31225 |
ProteinID:KRH31225.1 | PFAM:PF05701 | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF13 | UniParc:UPI000295C66B | InterPro:Web |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:33051745..33054975
Molecular Weight (calculated)
62848.9 Da
IEP (calculated)
7.101
GRAVY (calculated)
-0.676
Length
560 amino acids
Sequence
(BLAST)
(BLAST)
001: MAETRDAAAD GVPGTPAIRE MRPETATHAG IGSGGIRRVN FRAEIDTSPP FGSVKEAVTR FGGSGPWIPF FQNNIEDFDL KKVEEQAAEL EKDLIVKELE
101: TLDVLEELGA TKRIVEDLKQ QLQKEAMKCL ATQDVNSYEQ VGTTVIKEMD KENCGSNVND QEQVMQIPSP CSMSSSPDMI LIELKQAKLN LGKTINELGV
201: IQSSVESLNK KMKKEKLFLE RTREKLATKF AAVSAQERVQ EQTRLNPPAP HVEFNFGNTA NNFNSDSRQC NRMAETRRPE PSKPLNVYEE YGFSVKTAEM
301: RWLAAKKMEE AARAAEAIAL AEIKALSNNA ERSSGLVLPE PEKVTFAFGE CSPLNLKAQI PEESTLKKVI DSNFQVDETK ISKLTILKKL EEAAEEVLHS
401: KQVLTDALNR VETANRKQHA AKEALRRWIP EDDMKEYNNT INCNKFHQAG IYQDSLQDVT RSTTSNNDPK PALRTTISMR DVLSRKQVPE GYATRKEMEE
501: HTERQKVALS QMLQALREDL TLPPKTEKDG SNQKPFVAQR KKFGFIQISL PLAKPNKKRG
101: TLDVLEELGA TKRIVEDLKQ QLQKEAMKCL ATQDVNSYEQ VGTTVIKEMD KENCGSNVND QEQVMQIPSP CSMSSSPDMI LIELKQAKLN LGKTINELGV
201: IQSSVESLNK KMKKEKLFLE RTREKLATKF AAVSAQERVQ EQTRLNPPAP HVEFNFGNTA NNFNSDSRQC NRMAETRRPE PSKPLNVYEE YGFSVKTAEM
301: RWLAAKKMEE AARAAEAIAL AEIKALSNNA ERSSGLVLPE PEKVTFAFGE CSPLNLKAQI PEESTLKKVI DSNFQVDETK ISKLTILKKL EEAAEEVLHS
401: KQVLTDALNR VETANRKQHA AKEALRRWIP EDDMKEYNNT INCNKFHQAG IYQDSLQDVT RSTTSNNDPK PALRTTISMR DVLSRKQVPE GYATRKEMEE
501: HTERQKVALS QMLQALREDL TLPPKTEKDG SNQKPFVAQR KKFGFIQISL PLAKPNKKRG
001: MALAEEQHQN YHVAEAIPGT PGIHDVRIQP GSENSGFCVD PVGVSNVPGI RRVGLRAEID TSPPFGSVQE AVTRFGGRGY WVPFKLDDTF NGEFDIKRME
101: EHAAELEKDL IVKELETLDV LEALGSTKRI VEDLKRQLQQ EALRCSDQLS SDIKEMNDEH CHHNPMSSPD LILMELKQAK MNLGKTMDNL VVIQSSVESL
201: NKKMKEEKDF LEKTRAKLTY GFGGPVSLAE ELSRIKVKPQ VQDEPLREQV KMVAEADETG LNLQNKNSLR TAEMRLVAAR KMEEAAKAAE ALAIAEITML
301: SSNGESQDDD SEFCFPEPPR SPVTPRGLRI DNDFSTDKSS RRGILKKLEE ATEGVKQSKQ ALEAALNRVE IANVKQLAAE NAFRGWTKDS LKGDNFTPLN
401: HTRRSFFSHL NKHHEPLDIL PKPVLKSNIS MRDVLRRKQV PKEDVVAPQR QSLEGQIPRR NVNLSQMLKE LKQDVKFSAR GEKEEVHEEK QYVTQRRKFG
501: FIHITLPLQK QSKKKSSL
101: EHAAELEKDL IVKELETLDV LEALGSTKRI VEDLKRQLQQ EALRCSDQLS SDIKEMNDEH CHHNPMSSPD LILMELKQAK MNLGKTMDNL VVIQSSVESL
201: NKKMKEEKDF LEKTRAKLTY GFGGPVSLAE ELSRIKVKPQ VQDEPLREQV KMVAEADETG LNLQNKNSLR TAEMRLVAAR KMEEAAKAAE ALAIAEITML
301: SSNGESQDDD SEFCFPEPPR SPVTPRGLRI DNDFSTDKSS RRGILKKLEE ATEGVKQSKQ ALEAALNRVE IANVKQLAAE NAFRGWTKDS LKGDNFTPLN
401: HTRRSFFSHL NKHHEPLDIL PKPVLKSNIS MRDVLRRKQV PKEDVVAPQR QSLEGQIPRR NVNLSQMLKE LKQDVKFSAR GEKEEVHEEK QYVTQRRKFG
501: FIHITLPLQK QSKKKSSL
Arabidopsis Description
WEB family protein At2g40480 [Source:UniProtKB/Swiss-Prot;Acc:Q5XVC7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.