Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G101300.1 | Wheat | cytosol | 86.56 | 86.7 |
| Zm00001d028010_P001 | Maize | cytosol | 83.61 | 86.59 |
| EER92716 | Sorghum | cytosol | 83.93 | 86.34 |
| TraesCS5D01G107800.1 | Wheat | cytosol | 85.74 | 85.88 |
| TraesCS5A01G095100.1 | Wheat | cytosol | 86.07 | 85.09 |
| Zm00001d048217_P001 | Maize | cytosol | 81.31 | 84.79 |
| HORVU5Hr1G025740.13 | Barley | vacuole | 86.23 | 81.42 |
| GSMUA_Achr7P24020_001 | Banana | cytosol | 68.85 | 72.04 |
| VIT_04s0008g01350.t01 | Wine grape | cytosol | 62.79 | 67.08 |
| CDY67814 | Canola | cytosol | 61.97 | 66.43 |
| CDX70438 | Canola | cytosol | 61.8 | 66.26 |
| CDX91181 | Canola | cytosol | 61.8 | 66.14 |
| Bra023354.1-P | Field mustard | cytosol | 61.64 | 66.08 |
| CDX78461 | Canola | cytosol | 60.33 | 66.07 |
| PGSC0003DMT400017657 | Potato | nucleus | 62.46 | 66.03 |
| Solyc01g087650.2.1 | Tomato | plastid | 62.13 | 65.8 |
| AT5G11980.1 | Thale cress | cytosol | 61.15 | 65.55 |
| KRH69706 | Soybean | cytosol | 61.48 | 64.66 |
| KRH07953 | Soybean | cytosol | 60.98 | 64.36 |
| Bra006136.1-P | Field mustard | cytosol, nucleus, peroxisome | 61.48 | 62.92 |
| CDY04606 | Canola | cytosol | 7.38 | 45.92 |
Protein Annotations
| MapMan:22.6.2.8 | EntrezGene:4352423 | ProteinID:ABA99332.1 | EMBL:AK067402 | ProteinID:BAF29959.1 | ProteinID:BAT17474.1 |
| InterPro:COG8 | InterPro:COG8_Metazoal_Plant | InterPro:Cullin_repeat-like_dom_sf | ProteinID:EAZ20746.1 | GO:GO:0000003 | GO:GO:0000139 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 |
| GO:GO:0006891 | GO:GO:0007030 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009653 | GO:GO:0009856 |
| GO:GO:0009860 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0017119 | GO:GO:0030154 | GO:GO:0040007 | GO:GO:0048193 | EnsemblPlantsGene:Os12g0538300 | EnsemblPlants:Os12t0538300-01 |
| PFAM:PF04124 | PIRSF:PIRSF015415 | PANTHER:PTHR21311 | UniProt:Q2QP91 | SUPFAM:SSF74788 | UniParc:UPI0000680EEC |
| RefSeq:XP_015620630.1 | SEG:seg | : | : | : | : |
Description
Dor1-like protein family protein. (Os12t0538300-01)
Coordinates
chr12:+:21441319..21447715
Molecular Weight (calculated)
66713.5 Da
IEP (calculated)
4.818
GRAVY (calculated)
-0.115
Length
610 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVLDAGHRA TPEPSSSSSS AAAADMSGAS VLPLAGAAYQ PYVSELLSFS IERLHKEPEL LRVDAERVRR QMQEVAVENY GAFIAASEAL SFVRAQLEGF
101: DRHLEALIEE IPNLTSGCTE FVESAQQILE ERKLNQTLLA NHSTLLDLLE IPQLMDTCIR NGNYDEALDL EAFVSKISKL HPDLPVIQGL AVEVKKTIQS
201: LISQLLQKLR SNIQLPECLR IVAHLRRIGV FSESELRLQF LRCREAWLSG ILDDLDQRNV YGYLTGMVGY HRTHLFDVVN QYRAIFNNDK SGSDENYDGG
301: LLFSWAMHQI SNHLTTLQVM LPNITEGGSL SNIREQCMYC AMGLGLVGLD FRGLLPPIFE KAVLNLFSKN MGTAVENFQV VLDSHRWVPM PSVGFVANGV
401: VDETSDDVTP PSVLMEHPPL AVFVNGVSAA MNELRPCAPL SLKNVLAEEV VKGLQAVSDS LVRYNAMRML RGNESSLFLS LCQAFIEVAY PYCSACFGRC
501: YPNGAILITE RRSTFDAVSQ LLTVPARSNS SGISIERRQS GSIERKQSGA IERKQSEGIE RKQSIDESAG TTATDNGTPA NGPPPVANDD SGTSSAPAQP
601: DGQTTAAAST
101: DRHLEALIEE IPNLTSGCTE FVESAQQILE ERKLNQTLLA NHSTLLDLLE IPQLMDTCIR NGNYDEALDL EAFVSKISKL HPDLPVIQGL AVEVKKTIQS
201: LISQLLQKLR SNIQLPECLR IVAHLRRIGV FSESELRLQF LRCREAWLSG ILDDLDQRNV YGYLTGMVGY HRTHLFDVVN QYRAIFNNDK SGSDENYDGG
301: LLFSWAMHQI SNHLTTLQVM LPNITEGGSL SNIREQCMYC AMGLGLVGLD FRGLLPPIFE KAVLNLFSKN MGTAVENFQV VLDSHRWVPM PSVGFVANGV
401: VDETSDDVTP PSVLMEHPPL AVFVNGVSAA MNELRPCAPL SLKNVLAEEV VKGLQAVSDS LVRYNAMRML RGNESSLFLS LCQAFIEVAY PYCSACFGRC
501: YPNGAILITE RRSTFDAVSQ LLTVPARSNS SGISIERRQS GSIERKQSGA IERKQSEGIE RKQSIDESAG TTATDNGTPA NGPPPVANDD SGTSSAPAQP
601: DGQTTAAAST
001: MAMEVGEMSQ PEATASLLSL ASATQQPYVS ELLSFTLDRL HKEPELLRVD AERIQRQMQE VAVGNYRAFI TAADALLAIR QEVSSIDKHL ESLIGEVPKL
101: TSGCTEFIDS AENILEKRKM NQALLANHST LLDLLEIPQL MDTCVRNGNF DEALDLEAFV SKLATLHPKL PVIQALAAEV RQTTQSLLSQ LLQKLRSNIQ
201: LPECLRIIGY LRRIGVFGEY EMRLQFLRCR EAWLTGILED LDQKNAYEYL KGMINCHRMH LFDVVNQYRA IFSDDTSGSE ENYDGGLLFS WAMHQITSHL
301: KTLKIMLPKI TEGGSLSNIL DQCMYCAMGL GGVGLDFRGL LPPLFEEAVL NLFSKNMSTA VENFQLVLDS HRWVPLPSVG FPSSGINEDS KDDVTPPSYL
401: MEHPPLAVFI NGVSSALNEL RPCAPLSLKN VVAHELIKGL QAVSDSLLRY NTTRMLRLSE SNLFLSLCRA FVEVVFPHCA TCFGRCYPGG ATIVMDAKSA
501: YEGLGRILAA SSSQEPSNKS PKVISTDTKD ASENGVASQP EEKQAENPNA KEEDNSPIPL QTPEITPES
101: TSGCTEFIDS AENILEKRKM NQALLANHST LLDLLEIPQL MDTCVRNGNF DEALDLEAFV SKLATLHPKL PVIQALAAEV RQTTQSLLSQ LLQKLRSNIQ
201: LPECLRIIGY LRRIGVFGEY EMRLQFLRCR EAWLTGILED LDQKNAYEYL KGMINCHRMH LFDVVNQYRA IFSDDTSGSE ENYDGGLLFS WAMHQITSHL
301: KTLKIMLPKI TEGGSLSNIL DQCMYCAMGL GGVGLDFRGL LPPLFEEAVL NLFSKNMSTA VENFQLVLDS HRWVPLPSVG FPSSGINEDS KDDVTPPSYL
401: MEHPPLAVFI NGVSSALNEL RPCAPLSLKN VVAHELIKGL QAVSDSLLRY NTTRMLRLSE SNLFLSLCRA FVEVVFPHCA TCFGRCYPGG ATIVMDAKSA
501: YEGLGRILAA SSSQEPSNKS PKVISTDTKD ASENGVASQP EEKQAENPNA KEEDNSPIPL QTPEITPES
Arabidopsis Description
Conserved oligomeric Golgi complex component-related / COG complex component-like protein [Source:UniProtKB/TrEMBL;Acc:Q84K25]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.