Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G101300.1 | Wheat | cytosol | 92.57 | 98.19 |
| TraesCS5A01G095100.1 | Wheat | cytosol | 92.88 | 97.24 |
| TraesCS5D01G107800.1 | Wheat | cytosol | 91.18 | 96.72 |
| Os12t0538300-01 | Rice | cytosol | 81.42 | 86.23 |
| Zm00001d028010_P001 | Maize | cytosol | 76.78 | 84.21 |
| EER92716 | Sorghum | cytosol | 76.63 | 83.47 |
| Zm00001d048217_P001 | Maize | cytosol | 74.92 | 82.73 |
| GSMUA_Achr7P24020_001 | Banana | cytosol | 63.47 | 70.33 |
| VIT_04s0008g01350.t01 | Wine grape | cytosol | 58.67 | 66.37 |
| CDY67814 | Canola | cytosol | 57.59 | 65.38 |
| AT5G11980.1 | Thale cress | cytosol | 57.59 | 65.38 |
| CDX78461 | Canola | cytosol | 56.35 | 65.35 |
| PGSC0003DMT400017657 | Potato | nucleus | 58.36 | 65.34 |
| Solyc01g087650.2.1 | Tomato | plastid | 58.2 | 65.28 |
| CDX91181 | Canola | cytosol | 57.59 | 65.26 |
| CDX70438 | Canola | cytosol | 57.43 | 65.2 |
| Bra023354.1-P | Field mustard | cytosol | 57.28 | 65.03 |
| KRH69706 | Soybean | cytosol | 57.74 | 64.31 |
| KRH07953 | Soybean | cytosol | 56.66 | 63.32 |
| Bra006136.1-P | Field mustard | cytosol, nucleus, peroxisome | 57.28 | 62.08 |
| CDY04606 | Canola | cytosol | 6.81 | 44.9 |
Protein Annotations
| MapMan:22.6.2.8 | UniProt:A0A287QQA0 | InterPro:COG8 | InterPro:COG8_Metazoal_Plant | InterPro:Cullin_repeat-like_dom_sf | GO:GO:0000003 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 |
| GO:GO:0007030 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009653 | GO:GO:0009856 | GO:GO:0009860 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0017119 | GO:GO:0030154 | GO:GO:0040007 |
| GO:GO:0048193 | EnsemblPlantsGene:HORVU5Hr1G025740 | EnsemblPlants:HORVU5Hr1G025740.13 | PFAM:PF04124 | PIRSF:PIRSF015415 | PANTHER:PTHR21311 |
| SUPFAM:SSF74788 | UniParc:UPI000B4746B8 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:141767659..141772187
Molecular Weight (calculated)
70528.3 Da
IEP (calculated)
5.059
GRAVY (calculated)
-0.106
Length
646 amino acids
Sequence
(BLAST)
(BLAST)
001: LNKTPRVSTA KSPISFSTLS LSLQISLAMD LLDAGHHHSS ELPAAGADME GASVLPLSGA AYQPYVSELL SFSIERLHKE PELLRVDGER VRRQMQEVAV
101: ENYAAFIAAS EALSFVRAQL EGFDKHLEAL VEEIPNLTSG CTEFVESAHQ ILEERKLNQT LLANHSTLLD LLEIPQLMDT CIRNGNYDEA LDLEAFVSKI
201: SKLHPDLPVI QGLAAEVKKT IQSLISQLLQ KLRSNIQQLP ECLRIVAHLR RIGVFSESEL RLQFLRCREA WLSGILDDLD QRNVYDYLKG MVTCHRTHLF
301: DVVNQYRAIF NNDKSGSEEN SDGGLLFSWA MHQVSNHLTT LQVMLPNITE GGSLSNMLEN CMYCAMGLGL VGLDFRCLLP PIFENAVLNL FSKNMSTAVE
401: NFQVVLDSHR WVPMPSIGFV TNGAVDDTSD DVTPPSVLME HPPLAVFVNG VSAAMNELKP CAPLSLKHVL AQEVVKGLQA VSDSLVRYNA MRMLRGNESS
501: LFLSLCQAFI EVAYPYCAAC FGRCYTNGGA LITQCPSLLD AVSQLPIRSG SGISNIDRKP SGGIERRQSG GIERKQSGGI ERKQSEGIER RQSGGIERRQ
601: SIESVGTAAS ENGLVTNGPE PEATSDAGTT AAPAGADTQT DAPTST
101: ENYAAFIAAS EALSFVRAQL EGFDKHLEAL VEEIPNLTSG CTEFVESAHQ ILEERKLNQT LLANHSTLLD LLEIPQLMDT CIRNGNYDEA LDLEAFVSKI
201: SKLHPDLPVI QGLAAEVKKT IQSLISQLLQ KLRSNIQQLP ECLRIVAHLR RIGVFSESEL RLQFLRCREA WLSGILDDLD QRNVYDYLKG MVTCHRTHLF
301: DVVNQYRAIF NNDKSGSEEN SDGGLLFSWA MHQVSNHLTT LQVMLPNITE GGSLSNMLEN CMYCAMGLGL VGLDFRCLLP PIFENAVLNL FSKNMSTAVE
401: NFQVVLDSHR WVPMPSIGFV TNGAVDDTSD DVTPPSVLME HPPLAVFVNG VSAAMNELKP CAPLSLKHVL AQEVVKGLQA VSDSLVRYNA MRMLRGNESS
501: LFLSLCQAFI EVAYPYCAAC FGRCYTNGGA LITQCPSLLD AVSQLPIRSG SGISNIDRKP SGGIERRQSG GIERKQSGGI ERKQSEGIER RQSGGIERRQ
601: SIESVGTAAS ENGLVTNGPE PEATSDAGTT AAPAGADTQT DAPTST
001: MAMEVGEMSQ PEATASLLSL ASATQQPYVS ELLSFTLDRL HKEPELLRVD AERIQRQMQE VAVGNYRAFI TAADALLAIR QEVSSIDKHL ESLIGEVPKL
101: TSGCTEFIDS AENILEKRKM NQALLANHST LLDLLEIPQL MDTCVRNGNF DEALDLEAFV SKLATLHPKL PVIQALAAEV RQTTQSLLSQ LLQKLRSNIQ
201: LPECLRIIGY LRRIGVFGEY EMRLQFLRCR EAWLTGILED LDQKNAYEYL KGMINCHRMH LFDVVNQYRA IFSDDTSGSE ENYDGGLLFS WAMHQITSHL
301: KTLKIMLPKI TEGGSLSNIL DQCMYCAMGL GGVGLDFRGL LPPLFEEAVL NLFSKNMSTA VENFQLVLDS HRWVPLPSVG FPSSGINEDS KDDVTPPSYL
401: MEHPPLAVFI NGVSSALNEL RPCAPLSLKN VVAHELIKGL QAVSDSLLRY NTTRMLRLSE SNLFLSLCRA FVEVVFPHCA TCFGRCYPGG ATIVMDAKSA
501: YEGLGRILAA SSSQEPSNKS PKVISTDTKD ASENGVASQP EEKQAENPNA KEEDNSPIPL QTPEITPES
101: TSGCTEFIDS AENILEKRKM NQALLANHST LLDLLEIPQL MDTCVRNGNF DEALDLEAFV SKLATLHPKL PVIQALAAEV RQTTQSLLSQ LLQKLRSNIQ
201: LPECLRIIGY LRRIGVFGEY EMRLQFLRCR EAWLTGILED LDQKNAYEYL KGMINCHRMH LFDVVNQYRA IFSDDTSGSE ENYDGGLLFS WAMHQITSHL
301: KTLKIMLPKI TEGGSLSNIL DQCMYCAMGL GGVGLDFRGL LPPLFEEAVL NLFSKNMSTA VENFQLVLDS HRWVPLPSVG FPSSGINEDS KDDVTPPSYL
401: MEHPPLAVFI NGVSSALNEL RPCAPLSLKN VVAHELIKGL QAVSDSLLRY NTTRMLRLSE SNLFLSLCRA FVEVVFPHCA TCFGRCYPGG ATIVMDAKSA
501: YEGLGRILAA SSSQEPSNKS PKVISTDTKD ASENGVASQP EEKQAENPNA KEEDNSPIPL QTPEITPES
Arabidopsis Description
Conserved oligomeric Golgi complex component-related / COG complex component-like protein [Source:UniProtKB/TrEMBL;Acc:Q84K25]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.