Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- cytosol 5
- plastid 1
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
extracellular:
20496099
extracellular: 29876421 |
msms PMID:
20496099
doi
Institute for Plant Diseases and Plant Protection, Faculty of Natural Sciences, Leibniz Universität Hannover, Herrenhäuser Str.2, 30419 Hannover, Germany. dahal@ipp.uni-hannover.de
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400012843 | Potato | extracellular | 97.65 | 98.58 |
Solyc08g083370.2.1 | Tomato | cytosol | 88.73 | 92.2 |
Solyc08g013680.2.1 | Tomato | cytosol | 47.42 | 90.99 |
CDY55328 | Canola | cytosol | 84.51 | 87.38 |
Bra032616.1-P | Field mustard | cytosol | 83.1 | 87.19 |
CDY32448 | Canola | cytosol | 84.04 | 86.89 |
Bra037416.1-P | Field mustard | cytosol | 86.39 | 85.98 |
CDY07141 | Canola | cytosol | 85.92 | 85.51 |
Bra033292.1-P | Field mustard | cytosol | 84.98 | 85.38 |
CDX90003 | Canola | cytosol | 84.98 | 85.38 |
CDY15206 | Canola | cytosol | 83.57 | 85.17 |
KRH47754 | Soybean | cytosol | 84.51 | 84.91 |
AT1G01050.1 | Thale cress | cytosol | 84.51 | 84.91 |
Os04t0687100-01 | Rice | cytosol, plasma membrane | 84.51 | 84.51 |
GSMUA_Achr6P19560_001 | Banana | cytosol | 84.04 | 84.43 |
GSMUA_Achr7P03170_001 | Banana | cytosol | 83.57 | 83.96 |
TraesCS2D01G587100.1 | Wheat | cytosol | 83.1 | 83.89 |
CDY01933 | Canola | cytosol | 84.04 | 83.64 |
CDX97250 | Canola | cytosol | 84.04 | 83.64 |
Bra008551.1-P | Field mustard | cytosol | 84.04 | 83.64 |
EER94266 | Sorghum | cytosol | 79.81 | 83.33 |
AT2G46860.1 | Thale cress | cytosol | 84.51 | 83.33 |
Os10t0406100-01 | Rice | cytosol | 79.81 | 83.33 |
KXG27493 | Sorghum | cytosol | 83.57 | 83.18 |
Zm00001d026680_P003 | Maize | cytosol | 83.57 | 83.18 |
GSMUA_Achr3P22500_001 | Banana | cytosol | 82.63 | 83.02 |
Bra040479.1-P | Field mustard | cytosol | 84.04 | 82.87 |
CDY27516 | Canola | cytosol | 84.04 | 82.87 |
CDY48009 | Canola | cytosol | 84.04 | 82.87 |
KRG97263 | Soybean | cytosol | 81.69 | 82.46 |
KRH68981 | Soybean | cytosol | 81.22 | 81.99 |
TraesCS2A01G576400.1 | Wheat | golgi | 83.1 | 81.94 |
GSMUA_Achr8P07910_001 | Banana | cytosol | 80.75 | 81.13 |
TraesCS2B01G611000.2 | Wheat | cytosol | 82.16 | 80.65 |
AT4G01480.1 | Thale cress | cytosol | 81.69 | 80.56 |
VIT_02s0025g02980.t01 | Wine grape | cytosol | 80.75 | 80.37 |
Os01t0866500-01 | Rice | cytosol | 79.81 | 80.19 |
Zm00001d010171_P002 | Maize | cytosol, extracellular | 83.57 | 79.46 |
TraesCS1D01G273500.1 | Wheat | cytosol | 80.28 | 79.17 |
TraesCS1B01G355800.1 | Wheat | cytosol | 76.06 | 79.02 |
OQU87920 | Sorghum | cytosol | 61.03 | 78.79 |
TraesCS1B01G283300.1 | Wheat | cytosol | 79.81 | 78.7 |
TraesCS1A01G273500.1 | Wheat | cytosol | 79.81 | 78.7 |
TraesCS1D01G344800.2 | Wheat | cytosol | 75.59 | 78.54 |
TraesCS1A01G342700.1 | Wheat | cytosol | 75.59 | 78.54 |
Os05t0438500-01 | Rice | cytosol | 82.16 | 78.12 |
EES18298 | Sorghum | cytosol | 83.57 | 77.73 |
Solyc09g010380.2.1 | Tomato | cytosol | 78.4 | 77.31 |
KRH06335 | Soybean | cytosol | 78.87 | 75.34 |
KRG98973 | Soybean | cytosol | 69.01 | 75.0 |
TraesCS3B01G077900.2 | Wheat | plastid | 83.1 | 74.06 |
HORVU1Hr1G075660.1 | Barley | cytosol | 77.46 | 72.69 |
Zm00001d002889_P002 | Maize | cytosol | 83.1 | 69.96 |
HORVU1Hr1G075110.1 | Barley | plastid | 75.59 | 69.4 |
Solyc02g085050.2.1 | Tomato | cytosol | 81.22 | 64.55 |
KRG88877 | Soybean | cytosol | 34.74 | 64.35 |
KRG99305 | Soybean | cytosol | 60.09 | 63.68 |
Os01t0322300-00 | Rice | cytosol | 22.07 | 63.51 |
KRH72403 | Soybean | cytosol | 39.91 | 62.96 |
GSMUA_Achr5P26130_001 | Banana | plastid | 81.69 | 59.79 |
HORVU6Hr1G058900.2 | Barley | cytosol | 38.97 | 46.11 |
HORVU2Hr1G065020.1 | Barley | cytosol | 25.82 | 39.86 |
Solyc01g106430.2.1 | Tomato | plastid | 28.64 | 21.03 |
Solyc10g047950.1.1 | Tomato | plastid | 28.64 | 20.75 |
Protein Annotations
KEGG:00190+3.6.1.1 | Gene3D:3.90.80.10 | MapMan:35.1 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0004427 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0006796 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR036649 |
UniProt:K4DFR4 | HAMAP:MF_00209 | PFAM:PF00719 | ScanProsite:PS00387 | PANTHER:PTHR10286 | PANTHER:PTHR10286:SF10 |
InterPro:Pyrophosphatase | InterPro:Pyrophosphatase_sf | SUPFAM:SSF50324 | EnsemblPlantsGene:Solyc12g055830.1 | EnsemblPlants:Solyc12g055830.1.1 | UniParc:UPI0002769D1A |
Description
No Description!
Coordinates
chr12:-:61826984..61829359
Molecular Weight (calculated)
24366.2 Da
IEP (calculated)
5.164
GRAVY (calculated)
-0.437
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNEDGGDDL SPQRRAPRLN ERILSSISRR SVAAHPWHDL EIGPEAPSVF NVVIEISKGS KVKYELDKKT GLIKVDRILY SSVVYPQNYG FIPRTLCEDN
101: DPMDVLVLMQ EPVLPGCFLR ARAIGLMPMI DQGEKDDKII AVCADDPEYR HYTDIKQLPP HRLAEIRRFF EDYKKNENKD VAVDDFLPPS TAVDAIQYSM
201: DLYAEYILHS LRK
101: DPMDVLVLMQ EPVLPGCFLR ARAIGLMPMI DQGEKDDKII AVCADDPEYR HYTDIKQLPP HRLAEIRRFF EDYKKNENKD VAVDDFLPPS TAVDAIQYSM
201: DLYAEYILHS LRK
001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR
Arabidopsis Description
PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.