Factsheet for Zm00001d010171_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002889_P002
Zm00001d004553_P001
Zm00001d010171_P002
Zm00001d024940_P001
Zm00001d026680_P003
Zm00001d047985_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	Zm00001d002889_P002	AT1G01050.1	21798944
AT4G01480.1	Zm00001d010171_P002	AT1G01050.1	21798944
AT4G01480.1	Zm00001d026680_P003	AT1G01050.1	21798944
AT4G01480.1	Zm00001d047985_P002	AT2G32840.1	21798944
AT4G01480.1	Zm00001d004553_P001	AT5G65683.1	21798944
AT4G01480.1	Zm00001d024940_P001	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18298	Sorghum	cytosol	93.75	91.7
TraesCS1B01G283300.1	Wheat	cytosol	85.71	88.89
Bra032616.1-P	Field mustard	cytosol	80.36	88.67
TraesCS1D01G273500.1	Wheat	cytosol	84.82	87.96
GSMUA_Achr7P03170_001	Banana	cytosol	83.04	87.74
GSMUA_Achr6P19560_001	Banana	cytosol	83.04	87.74
TraesCS1A01G273500.1	Wheat	cytosol	84.38	87.5
PGSC0003DMT400015012	Potato	cytosol	74.55	87.43
Zm00001d026680_P003	Maize	cytosol	83.04	86.92
Solyc08g083370.2.1	Tomato	cytosol	79.46	86.83
GSMUA_Achr3P22500_001	Banana	cytosol	82.14	86.79
AT1G01050.1	Thale cress	cytosol	80.8	85.38
Bra033292.1-P	Field mustard	cytosol	80.36	84.91
GSMUA_Achr8P07910_001	Banana	cytosol	80.36	84.91
PGSC0003DMT400012843	Potato	extracellular	79.46	84.36
KRH47754	Soybean	cytosol	79.46	83.96
Os05t0438500-01	Rice	cytosol	83.93	83.93
Solyc12g055830.1.1	Tomato	extracellular	79.46	83.57
KRG97263	Soybean	cytosol	78.57	83.41
AT2G46860.1	Thale cress	cytosol	80.36	83.33
Bra037416.1-P	Field mustard	cytosol	79.46	83.18
KRH68981	Soybean	cytosol	78.12	82.94
Bra040479.1-P	Field mustard	cytosol	79.91	82.87
Bra008551.1-P	Field mustard	cytosol	78.57	82.24
Solyc08g013680.2.1	Tomato	cytosol	40.62	81.98
Zm00001d051564_P001	Maize	cytosol	70.09	81.77
PGSC0003DMT400031865	Potato	cytosol	76.79	81.13
AT4G01480.1	Thale cress	cytosol	77.23	80.09
VIT_02s0025g02980.t01	Wine grape	cytosol	75.45	78.97
HORVU1Hr1G075110.1	Barley	plastid	80.8	78.02
Zm00001d035616_P001	Maize	cytosol	76.34	77.73
CDY69447	Canola	cytosol	27.23	77.22
KRG98973	Soybean	cytosol	66.96	76.53
KRH06335	Soybean	cytosol	75.0	75.34
Zm00001d002889_P002	Maize	cytosol	83.93	74.31
KRG88877	Soybean	cytosol	34.38	66.96
KRH72403	Soybean	cytosol	39.73	65.93
KRG99305	Soybean	cytosol	57.59	64.18
GSMUA_Achr5P26130_001	Banana	plastid	81.7	62.89
Zm00001d017770_P001	Maize	mitochondrion	71.43	50.47
HORVU6Hr1G058900.2	Barley	cytosol	40.18	50.0
HORVU2Hr1G065020.1	Barley	cytosol	27.23	44.2
Zm00001d018197_P001	Maize	plastid	28.12	21.88

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:100272302	Gene3D:3.90.80.10	MapMan:35.1	ProteinID:AQK93560.1	UniProt:B4FCR7
EMBL:BT034905	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649	HAMAP:MF_00209	PFAM:PF00719
ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF10	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324
UniParc:UPI00017B67F9	EnsemblPlantsGene:Zm00001d010171	EnsemblPlants:Zm00001d010171_P002	EnsemblPlants:Zm00001d010171_T002	:	:

Description

Soluble inorganic pyrophosphatase 1

Coordinates

chr8:+:102865072..102866878

Molecular Weight (calculated)

25589.6 Da

IEP (calculated)

5.666

GRAVY (calculated)

-0.503

Length

224 amino acids

Sequence
(BLAST)

001: MSQDQENGGT NGQHAADVME VEPKRRAPRL NERILSSLSR RSVAAHPWHD LEIGPEAPAV FNVVVEITKG SKVKYELDKK TGLIKVDRIL YSSVVYPHNY
101: GFVPRTLCED NDPMDVLVLM QEPVLPGAFL RARAIGLMPM IDQGEKDDKI IAVCADDPEY RHYNDISELS PHRLQEIRRF FEDYKKNENK EVAVNDFLPA
201: AAAREAIQYS MDLYGQYIMQ TLRR

Best Arabidopsis Sequence Match ( AT2G46860.1 )
(BLAST)

001: MSEEAYEETQ ESSQSPRPVP KLNERILSTL SRRSVAAHPW HDLEIGPEAP LVFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR

Arabidopsis Description

PPA3PPa3 [Source:UniProtKB/TrEMBL;Acc:A0A178VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.