CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92590
EER94266
EES18298
KXG27493
OQU81040
OQU87920

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	EER94266	AT1G01050.1	21798944
AT4G01480.1	EES18298	AT1G01050.1	21798944
AT4G01480.1	KXG27493	AT1G01050.1	21798944
AT4G01480.1	OQU87920	AT1G01050.1	21798944
AT4G01480.1	EER92590	AT2G32840.1	21798944
AT4G01480.1	OQU81040	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010171_P002	Maize	cytosol, extracellular	91.7	93.75
PGSC0003DMT400015012	Potato	cytosol	73.8	88.48
KXG27493	Sorghum	cytosol	82.53	88.32
Bra032616.1-P	Field mustard	cytosol	77.73	87.68
Solyc08g083370.2.1	Tomato	cytosol	78.17	87.32
GSMUA_Achr7P03170_001	Banana	cytosol	80.79	87.26
GSMUA_Achr6P19560_001	Banana	cytosol	80.79	87.26
GSMUA_Achr3P22500_001	Banana	cytosol	80.79	87.26
TraesCS1B01G283300.1	Wheat	cytosol	81.66	86.57
KRH47754	Soybean	cytosol	79.48	85.85
TraesCS1D01G273500.1	Wheat	cytosol	80.79	85.65
GSMUA_Achr8P07910_001	Banana	cytosol	79.04	85.38
TraesCS1A01G273500.1	Wheat	cytosol	80.35	85.19
AT1G01050.1	Thale cress	cytosol	78.6	84.91
Bra033292.1-P	Field mustard	cytosol	78.6	84.91
Os05t0438500-01	Rice	cytosol	82.97	84.82
PGSC0003DMT400012843	Potato	extracellular	77.73	84.36
KRG97263	Soybean	cytosol	77.73	84.36
Bra037416.1-P	Field mustard	cytosol	78.6	84.11
KRH68981	Soybean	cytosol	77.29	83.89
EER94266	Sorghum	cytosol	74.67	83.82
Solyc12g055830.1.1	Tomato	extracellular	77.73	83.57
Bra008551.1-P	Field mustard	cytosol	77.73	83.18
AT2G46860.1	Thale cress	cytosol	78.17	82.87
Bra040479.1-P	Field mustard	cytosol	77.73	82.41
Solyc08g013680.2.1	Tomato	cytosol	39.74	81.98
PGSC0003DMT400031865	Potato	cytosol	75.55	81.6
OQU87920	Sorghum	cytosol	58.08	80.61
AT4G01480.1	Thale cress	cytosol	75.11	79.63
KXG30923	Sorghum	cytosol	71.62	79.61
VIT_02s0025g02980.t01	Wine grape	cytosol	74.24	79.44
EES18902	Sorghum	cytosol	72.05	77.1
KRG98973	Soybean	cytosol	65.94	77.04
CDY69447	Canola	cytosol	26.2	75.95
HORVU1Hr1G075110.1	Barley	plastid	76.86	75.86
KRH06335	Soybean	cytosol	72.93	74.89
KRG88877	Soybean	cytosol	34.06	67.83
KRH72403	Soybean	cytosol	39.3	66.67
KRG99305	Soybean	cytosol	56.77	64.68
GSMUA_Achr5P26130_001	Banana	plastid	79.04	62.2
HORVU6Hr1G058900.2	Barley	cytosol	37.99	48.33
HORVU2Hr1G065020.1	Barley	cytosol	26.2	43.48
EES05862	Sorghum	plastid	26.2	20.83

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	EntrezGene:8072495	UniProt:C5YYQ6	EnsemblPlants:EES18298
ProteinID:EES18298	ProteinID:EES18298.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649	HAMAP:MF_00209
PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF10	MetaCyc:PWY-7805	MetaCyc:PWY-7807
InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	EnsemblPlantsGene:SORBI_3009G152600	SUPFAM:SSF50324	unigene:Sbi.10880	UniParc:UPI000189D8CD
RefSeq:XP_002439868.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:50899846..50901775

Molecular Weight (calculated)

26164.3 Da

IEP (calculated)

5.866

GRAVY (calculated)

-0.511

Length

229 amino acids

Sequence
(BLAST)

001: MSHPENGGAS NGHAAEEHQD VMMEVEPKQR RAPRLNERIL SSLSRRSVAA HPWHDLEIGP EAPAVFNVVV EITKGSKVKY ELDKKTGLIK VDRVLYSSVV
101: YPHNYGFIPR TLCEDNDPMD VLVLMQEPVL PGAFLRARAI GLMPMIDQGE KDDKIIAVCA DDPEYRHYND ISELSPHRLQ EIRRFFEDYK KNENKEVAVN
201: DFLPAAAARE AIQYSMDLYG QYIMQTLRR

Best Arabidopsis Sequence Match ( AT2G46860.1 )
(BLAST)

001: MSEEAYEETQ ESSQSPRPVP KLNERILSTL SRRSVAAHPW HDLEIGPEAP LVFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR

Arabidopsis Description

PPA3PPa3 [Source:UniProtKB/TrEMBL;Acc:A0A178VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.