CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035616_P001	Maize	cytosol	96.26	93.64
Os05t0114000-01	Rice	cytosol	93.93	93.06
TraesCS1D01G040000.1	Wheat	cytosol	87.85	86.64
GSMUA_Achr6P15350_001	Banana	unclear	86.92	86.51
TraesCS1B01G049200.1	Wheat	cytosol	86.92	85.71
TraesCS1A01G038300.1	Wheat	cytosol	86.45	85.25
VIT_08s0040g02470.t01	Wine grape	cytosol	83.18	82.41
CDX73537	Canola	cytosol	83.18	82.03
AT3G53620.1	Thale cress	cytosol	82.71	81.94
Bra039808.1-P	Field mustard	cytosol	82.71	81.57
CDX78192	Canola	cytosol	82.71	81.57
PGSC0003DMT400023069	Potato	cytosol	82.24	81.48
EER94266	Sorghum	cytosol	77.57	81.37
KRH32318	Soybean	cytosol	81.78	81.02
Solyc09g010380.2.1	Tomato	cytosol	81.78	81.02
KRH19727	Soybean	cytosol	81.78	81.02
Bra007016.1-P	Field mustard	cytosol	81.78	80.65
HORVU1Hr1G005920.4	Barley	cytosol, plastid	87.85	78.66
KXG30923	Sorghum	cytosol	75.7	78.64
KXG27493	Sorghum	cytosol	76.64	76.64
KRG95822	Soybean	cytosol	80.84	75.55
KRH67552	Soybean	cytosol	81.31	75.32
EES18298	Sorghum	cytosol	77.1	72.05
GSMUA_Achr3P17710_001	Banana	cytosol, extracellular	57.48	71.51
OQU87920	Sorghum	cytosol	53.27	69.09
EES05862	Sorghum	plastid	28.04	20.83

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	EntrezGene:8068691	UniProt:C5YYL5	EnsemblPlants:EES18902
ProteinID:EES18902	ProteinID:EES18902.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649	HAMAP:MF_00209
PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF40	MetaCyc:PWY-7805	MetaCyc:PWY-7807
InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	EnsemblPlantsGene:SORBI_3009G016000	SUPFAM:SSF50324	unigene:Sbi.3131	UniParc:UPI0001A88A1A
RefSeq:XP_002440472.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:1486647..1490500

Molecular Weight (calculated)

24235.2 Da

IEP (calculated)

5.367

GRAVY (calculated)

-0.245

Length

214 amino acids

Sequence
(BLAST)

001: MAPAVEAVKE TGSFQKVPAL NERILSTMSR RSVAAHPWHD LEIGPGAPTI FNCVIEIPRG SKVKYELDKK TGLIKVDRVL YSSVVYPHNY GFIPRTLCED
101: SDPLDVLVIM QEPVIPGCFL RAKAIGVMPM IDQGEADDKI IAVCADDPEY KHYNDIKDLP PHRLAEIRRF FEDYKKNENK EVAVNDFLPA TEAYEVIQHS
201: MDLYATYIVE GLRR

Best Arabidopsis Sequence Match ( AT3G53620.1 )
(BLAST)

001: MAPPIEVSTK SYVEKHVSLP TLNERILSSM SHRSVAAHPW HDLEIGPEAP IIFNCVVEIG KGSKVKYELD KTTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDSDPIDVLV IMQEPVIPGC FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LPPHRMAEIR RFFEDYKKNE NKEVAVNDFL PATAAYDAVQ
201: HSMDLYADYV VENLRR

Arabidopsis Description

PPA4PPa4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.