Factsheet for TraesCS1A01G038300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G040000.1	Wheat	cytosol	98.16	98.16
TraesCS1B01G049200.1	Wheat	cytosol	97.23	97.23
HORVU1Hr1G005920.4	Barley	cytosol, plastid	97.23	88.28
Os05t0114000-01	Rice	cytosol	87.56	87.96
EES18902	Sorghum	cytosol	85.25	86.45
Zm00001d035616_P001	Maize	cytosol	86.18	85.0
GSMUA_Achr6P15350_001	Banana	unclear	82.49	83.26
KRH19727	Soybean	cytosol	82.03	82.41
CDX78192	Canola	cytosol	82.03	82.03
CDX73537	Canola	cytosol	82.03	82.03
VIT_08s0040g02470.t01	Wine grape	cytosol	81.57	81.94
Bra039808.1-P	Field mustard	cytosol	81.57	81.57
KRH32318	Soybean	cytosol	81.11	81.48
Bra007016.1-P	Field mustard	cytosol	81.11	81.11
AT3G53620.1	Thale cress	cytosol	80.65	81.02
Solyc09g010380.2.1	Tomato	cytosol	80.18	80.56
PGSC0003DMT400023069	Potato	cytosol	79.72	80.09
TraesCS3A01G534700.1	Wheat	plastid	87.1	79.75
TraesCS3A01G534500.1	Wheat	cytosol, plastid	86.64	79.32
TraesCS6A01G272300.1	Wheat	cytosol	75.12	76.17
TraesCS1A01G342700.1	Wheat	cytosol	70.97	75.12
KRG95822	Soybean	cytosol	77.42	73.36
KRH67552	Soybean	cytosol	77.88	73.16
TraesCS2A01G576400.1	Wheat	golgi	72.81	73.15
TraesCS1A01G273500.1	Wheat	cytosol	70.05	70.37
GSMUA_Achr3P17710_001	Banana	cytosol, extracellular	54.38	68.6
TraesCS6A01G329500.1	Wheat	golgi	27.19	20.56

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649
HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF40	InterPro:Pyrophosphatase
InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	EnsemblPlantsGene:TraesCS1A01G038300	EnsemblPlants:TraesCS1A01G038300.1	TIGR:cd00412	:

Description

No Description!

Coordinates

chr1A:-:21024515..21026280

Molecular Weight (calculated)

24421.5 Da

IEP (calculated)

5.613

GRAVY (calculated)

-0.254

Length

217 amino acids

Sequence
(BLAST)

001: MAPAIEAAEK VKVASTPIKP PVLNERILSS MTRRPGSAHS WHDLEIGPDA PTIFNCVTEI PRGSKVKYEL DKKTGLIMVD RVLYSSVVYP HNHGFIPRTL
101: CDDSDPMDVL VIMQEPVVPG CFLRAKAIGL MPMIDQGEAD DKIIAVCADD PEYKHFNDIK ELPPHRLAEI RRFFEDYKKN ENKEVAVNDF LPATAAYEAI
201: QHSMDLYATY VVEGLRR

Best Arabidopsis Sequence Match ( AT1G01050.1 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.