Factsheet for TraesCS3A01G534700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G534500.1	Wheat	cytosol, plastid	99.58	99.58
TraesCS3B01G611800.1	Wheat	cytosol	93.25	96.93
TraesCS3B01G611600.1	Wheat	golgi	94.51	96.14
HORVU3Hr1G116580.1	Barley	cytosol	90.72	93.48
TraesCS1A01G038300.1	Wheat	cytosol	79.75	87.1
TraesCS3D01G540100.1	Wheat	cytosol, plastid	94.51	85.17
VIT_08s0040g02470.t01	Wine grape	cytosol	77.22	84.72
GSMUA_Achr6P15350_001	Banana	unclear	75.95	83.72
Solyc09g010380.2.1	Tomato	cytosol	75.95	83.33
Bra039808.1-P	Field mustard	cytosol	75.95	82.95
CDX73537	Canola	cytosol	75.95	82.95
CDX78192	Canola	cytosol	75.95	82.95
PGSC0003DMT400023069	Potato	cytosol	75.53	82.87
AT3G53620.1	Thale cress	cytosol	75.11	82.41
Bra007016.1-P	Field mustard	cytosol	75.11	82.03
KRH19727	Soybean	cytosol	74.26	81.48
KRH32318	Soybean	cytosol	73.42	80.56
TraesCS1A01G342700.1	Wheat	cytosol	67.93	78.54
TraesCS6A01G272300.1	Wheat	cytosol	70.89	78.5
TraesCS2A01G576400.1	Wheat	golgi	69.62	76.39
KRG95822	Soybean	cytosol	73.42	75.98
TraesCS1A01G273500.1	Wheat	cytosol	69.2	75.93
KRH67552	Soybean	cytosol	73.84	75.76
GSMUA_Achr3P17710_001	Banana	cytosol, extracellular	51.9	71.51
HORVU3Hr1G116650.3	Barley	cytosol, endoplasmic reticulum	91.14	67.71
TraesCS6A01G329500.1	Wheat	golgi	26.58	21.95

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649
HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF40	InterPro:Pyrophosphatase
InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	EnsemblPlantsGene:TraesCS3A01G534700	EnsemblPlants:TraesCS3A01G534700.1	TIGR:cd00412	SEG:seg

Description

No Description!

Coordinates

chr3A:-:746363107..746364055

Molecular Weight (calculated)

26274.3 Da

IEP (calculated)

5.166

GRAVY (calculated)

-0.376

Length

237 amino acids

Sequence
(BLAST)

001: MAPSQEVAPP AAAITKDPST NGNGNGNGNG TAAPAPKTKT PALNERILSS ITRRSVAAHP WHDLEIGPDA PTIFNCVIEI PKGSKVKYEL DKKTGLIKVD
101: RVLYSSVVYP HNYGFIPRTL CDDSDPIDVL VIMQEPVVPG CFLRAKAIGL MPMIDQGEAD DKIIAVCADD PEYRHFNDIK ELPPHRLAEI RRFFEDYKKN
201: ENKEVAVNDF LPSEDAYEAI QHSMDLYATY IVEGLRR

Best Arabidopsis Sequence Match ( AT3G53620.1 )
(BLAST)

001: MAPPIEVSTK SYVEKHVSLP TLNERILSSM SHRSVAAHPW HDLEIGPEAP IIFNCVVEIG KGSKVKYELD KTTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDSDPIDVLV IMQEPVIPGC FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LPPHRMAEIR RFFEDYKKNE NKEVAVNDFL PATAAYDAVQ
201: HSMDLYADYV VENLRR

Arabidopsis Description

PPA4PPa4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.