Factsheet for TraesCS3B01G611600.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytoskeleton, cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G611800.1	Wheat	cytosol	95.71	97.81
TraesCS3A01G534700.1	Wheat	plastid	96.14	94.51
TraesCS3A01G534500.1	Wheat	cytosol, plastid	95.71	94.09
HORVU3Hr1G116580.1	Barley	cytosol	91.85	93.04
TraesCS1B01G049200.1	Wheat	cytosol	80.69	86.64
VIT_08s0040g02470.t01	Wine grape	cytosol	78.11	84.26
GSMUA_Achr6P15350_001	Banana	unclear	76.82	83.26
Bra039808.1-P	Field mustard	cytosol	76.82	82.49
CDX73537	Canola	cytosol	76.82	82.49
CDX78192	Canola	cytosol	76.82	82.49
Solyc09g010380.2.1	Tomato	cytosol	76.39	82.41
PGSC0003DMT400023069	Potato	cytosol	75.97	81.94
Bra007016.1-P	Field mustard	cytosol	75.97	81.57
AT3G53620.1	Thale cress	cytosol	75.54	81.48
KRH19727	Soybean	cytosol	75.11	81.02
KRH32318	Soybean	cytosol	74.25	80.09
TraesCS1B01G355800.1	Wheat	cytosol	69.1	78.54
TraesCS6B01G299800.1	Wheat	cytosol	71.24	77.57
TraesCS1B01G283300.1	Wheat	cytosol	70.82	76.39
KRG95822	Soybean	cytosol	73.82	75.11
KRH67552	Soybean	cytosol	74.25	74.89
TraesCS2B01G611000.2	Wheat	cytosol	69.53	74.65
GSMUA_Achr3P17710_001	Banana	cytosol, extracellular	52.36	70.93
TraesCS3B01G077900.2	Wheat	plastid	69.96	68.2
HORVU3Hr1G116650.3	Barley	cytosol, endoplasmic reticulum	92.27	67.4
TraesCS6B01G360300.1	Wheat	plastid	27.04	21.95

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649
HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF40	InterPro:Pyrophosphatase
InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	EnsemblPlantsGene:TraesCS3B01G611600	EnsemblPlants:TraesCS3B01G611600.1	TIGR:cd00412	SEG:seg

Description

No Description!

Coordinates

chr3B:+:829273469..829274381

Molecular Weight (calculated)

25986.9 Da

IEP (calculated)

5.021

GRAVY (calculated)

-0.391

Length

233 amino acids

Sequence
(BLAST)

001: MAPSQEVTAA TKEPSTNGNG TNGTNGTAAA APKTKTPALN ERILSSITRR SVAAHPWHDL EIGPDAPTIF NCVIEIPKGS KIKYELDKKT GLIKVDRVLY
101: SSVVYPHNYG FIPRTLCDDD DPIDVLVIMQ EPVVPGCFLR AKAIGLMPMI DQGEADDKII AVCADDPEYR HFNDIKELPP HRLAEIRRFF EDYKKNENKE
201: VAVNDFLPSE DAYEAIQHSM DLYATYIVEG LRR

Best Arabidopsis Sequence Match ( AT1G01050.1 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.