Factsheet for TraesCS2B01G611000.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G273500.1
TraesCS1A01G342700.1
TraesCS1B01G283300.1
TraesCS1B01G355800.1
TraesCS1D01G273500.1
TraesCS1D01G344800.2
TraesCS2A01G045100.1
TraesCS2A01G576400.1
TraesCS2B01G057300.1
TraesCS2B01G611000.2
TraesCS2D01G043700.1
TraesCS2D01G587100.1
TraesCS3B01G077900.2
TraesCS4A01G076800.1
TraesCS4B01G232900.1
TraesCS4D01G234100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	TraesCS1A01G273500.1	AT1G01050.1	21798944
AT4G01480.1	TraesCS1A01G342700.1	AT1G01050.1	21798944
AT4G01480.1	TraesCS1B01G283300.1	AT1G01050.1	21798944
AT4G01480.1	TraesCS1B01G355800.1	AT1G01050.1	21798944
AT4G01480.1	TraesCS1D01G273500.1	AT1G01050.1	21798944
AT4G01480.1	TraesCS1D01G344800.2	AT1G01050.1	21798944
AT4G01480.1	TraesCS2A01G576400.1	AT1G01050.1	21798944
AT4G01480.1	TraesCS2B01G611000.2	AT1G01050.1	21798944
AT4G01480.1	TraesCS2D01G587100.1	AT1G01050.1	21798944
AT4G01480.1	TraesCS3B01G077900.2	AT1G01050.1	21798944
AT4G01480.1	TraesCS4A01G076800.1	AT2G32840.1	21798944
AT4G01480.1	TraesCS4B01G232900.1	AT2G32840.1	21798944
AT4G01480.1	TraesCS4D01G234100.1	AT2G32840.1	21798944
AT4G01480.1	TraesCS2A01G045100.1	AT5G65683.1	21798944
AT4G01480.1	TraesCS2B01G057300.1	AT5G65683.1	21798944
AT4G01480.1	TraesCS2D01G043700.1	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G576400.1	Wheat	golgi	98.62	99.07
TraesCS2D01G587100.1	Wheat	cytosol	95.39	98.1
Os04t0687100-01	Rice	cytosol, plasma membrane	93.09	94.84
KXG27493	Sorghum	cytosol	91.71	92.99
Zm00001d026680_P003	Maize	cytosol	91.71	92.99
GSMUA_Achr3P22500_001	Banana	cytosol	85.71	87.74
GSMUA_Achr7P03170_001	Banana	cytosol	85.71	87.74
GSMUA_Achr6P19560_001	Banana	cytosol	84.79	86.79
GSMUA_Achr8P07910_001	Banana	cytosol	84.79	86.79
PGSC0003DMT400015012	Potato	cytosol	76.04	86.39
TraesCS3B01G077900.2	Wheat	plastid	94.93	86.19
Solyc08g083370.2.1	Tomato	cytosol	80.18	84.88
Bra032616.1-P	Field mustard	cytosol	79.26	84.73
KRH47754	Soybean	cytosol	81.11	83.02
AT1G01050.1	Thale cress	cytosol	80.65	82.55
Solyc12g055830.1.1	Tomato	extracellular	80.65	82.16
Bra033292.1-P	Field mustard	cytosol	80.18	82.08
PGSC0003DMT400012843	Potato	extracellular	79.72	81.99
Solyc08g013680.2.1	Tomato	cytosol	41.47	81.08
AT2G46860.1	Thale cress	cytosol	80.65	81.02
TraesCS1B01G283300.1	Wheat	cytosol	80.65	81.02
Bra037416.1-P	Field mustard	cytosol	79.72	80.84
Bra040479.1-P	Field mustard	cytosol	80.18	80.56
Bra008551.1-P	Field mustard	cytosol	79.26	80.37
KRH68981	Soybean	cytosol	77.88	80.09
KRG97263	Soybean	cytosol	77.88	80.09
TraesCS1B01G355800.1	Wheat	cytosol	75.58	80.0
TraesCS6B01G299800.1	Wheat	cytosol	78.34	79.44
PGSC0003DMT400031865	Potato	cytosol	76.96	78.77
Zm00001d002889_P002	Maize	cytosol	91.71	78.66
VIT_02s0025g02980.t01	Wine grape	cytosol	76.96	78.04
CDY69447	Canola	cytosol	28.11	77.22
AT4G01480.1	Thale cress	cytosol	76.04	76.39
KRG98973	Soybean	cytosol	66.82	73.98
KRH06335	Soybean	cytosol	75.58	73.54
TraesCS1B01G049200.1	Wheat	cytosol	72.35	72.35
TraesCS3B01G611800.1	Wheat	cytosol	75.12	71.49
TraesCS3B01G611600.1	Wheat	golgi	74.65	69.53
Os01t0322300-00	Rice	cytosol	23.5	68.92
KRG88877	Soybean	cytosol	35.94	67.83
KRH72403	Soybean	cytosol	40.09	64.44
KRG99305	Soybean	cytosol	59.45	64.18
GSMUA_Achr5P26130_001	Banana	plastid	82.95	61.86
TraesCS6B01G360300.1	Wheat	plastid	27.19	20.56

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649
HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF22	InterPro:Pyrophosphatase
InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	EnsemblPlantsGene:TraesCS2B01G611000	EnsemblPlants:TraesCS2B01G611000.2	TIGR:cd00412	SEG:seg

Description

No Description!

Coordinates

chr2B:+:790584052..790586847

Molecular Weight (calculated)

24537.2 Da

IEP (calculated)

5.155

GRAVY (calculated)

-0.400

Length

217 amino acids

Sequence
(BLAST)

001: MSEEDSTSAA AAQQPTSRPA PKLNERILSS LSRRAVAAHP WHDLEIGPGA PAVFNVVVEI TKGSKVKYEL DKKTGLIKVD RVLYSSVVYP HNYGFIPRTL
101: CEDNDPMDVL VLMQEPVIPG SFLRARAIGL MPMIDQGEKD DKIIAVCADD PEYRHYNDIS ELSPHRLQEI KRFFEDYKKN ENKEVDVDAF LPATTAREAI
201: QYSLDLYAQY ILQSLRQ

Best Arabidopsis Sequence Match ( AT2G46860.1 )
(BLAST)

001: MSEEAYEETQ ESSQSPRPVP KLNERILSTL SRRSVAAHPW HDLEIGPEAP LVFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR

Arabidopsis Description

PPA3PPa3 [Source:UniProtKB/TrEMBL;Acc:A0A178VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.