Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G576400.1 | Wheat | golgi | 99.05 | 96.76 |
| TraesCS2B01G611000.2 | Wheat | cytosol | 98.1 | 95.39 |
| Os04t0687100-01 | Rice | cytosol, plasma membrane | 96.21 | 95.31 |
| KXG27493 | Sorghum | cytosol | 95.26 | 93.93 |
| Zm00001d026680_P003 | Maize | cytosol | 95.26 | 93.93 |
| GSMUA_Achr7P03170_001 | Banana | cytosol | 89.1 | 88.68 |
| GSMUA_Achr3P22500_001 | Banana | cytosol | 88.63 | 88.21 |
| GSMUA_Achr6P19560_001 | Banana | cytosol | 88.15 | 87.74 |
| PGSC0003DMT400015012 | Potato | cytosol | 79.15 | 87.43 |
| GSMUA_Achr8P07910_001 | Banana | cytosol | 87.68 | 87.26 |
| Solyc08g083370.2.1 | Tomato | cytosol | 83.41 | 85.85 |
| Bra032616.1-P | Field mustard | cytosol | 81.99 | 85.22 |
| KRH47754 | Soybean | cytosol | 84.36 | 83.96 |
| Solyc12g055830.1.1 | Tomato | extracellular | 83.89 | 83.1 |
| AT1G01050.1 | Thale cress | cytosol | 83.41 | 83.02 |
| PGSC0003DMT400012843 | Potato | extracellular | 82.94 | 82.94 |
| Solyc08g013680.2.1 | Tomato | cytosol | 43.6 | 82.88 |
| Bra033292.1-P | Field mustard | cytosol | 82.94 | 82.55 |
| TraesCS1D01G273500.1 | Wheat | cytosol | 84.36 | 82.41 |
| AT2G46860.1 | Thale cress | cytosol | 83.41 | 81.48 |
| Bra037416.1-P | Field mustard | cytosol | 82.46 | 81.31 |
| KRG97263 | Soybean | cytosol | 81.04 | 81.04 |
| Bra040479.1-P | Field mustard | cytosol | 82.94 | 81.02 |
| Bra008551.1-P | Field mustard | cytosol | 81.99 | 80.84 |
| KRH68981 | Soybean | cytosol | 80.57 | 80.57 |
| PGSC0003DMT400031865 | Potato | cytosol | 80.09 | 79.72 |
| TraesCS1D01G344800.2 | Wheat | cytosol | 77.25 | 79.51 |
| Zm00001d002889_P002 | Maize | cytosol | 95.26 | 79.45 |
| TraesCS6D01G252400.1 | Wheat | cytosol | 80.57 | 79.44 |
| VIT_02s0025g02980.t01 | Wine grape | cytosol | 79.62 | 78.5 |
| AT4G01480.1 | Thale cress | cytosol | 79.15 | 77.31 |
| CDY69447 | Canola | cytosol | 28.44 | 75.95 |
| KRG98973 | Soybean | cytosol | 69.67 | 75.0 |
| KRH06335 | Soybean | cytosol | 78.67 | 74.44 |
| TraesCS1D01G040000.1 | Wheat | cytosol | 75.36 | 73.27 |
| TraesCS3D01G539900.1 | Wheat | cytosol | 76.78 | 72.32 |
| Os01t0322300-00 | Rice | cytosol | 24.17 | 68.92 |
| KRG88877 | Soybean | cytosol | 36.97 | 67.83 |
| KRH72403 | Soybean | cytosol | 41.23 | 64.44 |
| KRG99305 | Soybean | cytosol | 60.66 | 63.68 |
| TraesCS3D01G540100.1 | Wheat | cytosol, plastid | 77.73 | 62.36 |
| GSMUA_Achr5P26130_001 | Banana | plastid | 85.78 | 62.2 |
| TraesCS6D01G308400.1 | Wheat | plastid | 27.96 | 20.56 |
Protein Annotations
| KEGG:00190+3.6.1.1 | Gene3D:3.90.80.10 | MapMan:35.1 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004427 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006796 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR036649 |
| HAMAP:MF_00209 | PFAM:PF00719 | ScanProsite:PS00387 | PANTHER:PTHR10286 | PANTHER:PTHR10286:SF22 | InterPro:Pyrophosphatase |
| InterPro:Pyrophosphatase_sf | SUPFAM:SSF50324 | EnsemblPlantsGene:TraesCS2D01G587100 | EnsemblPlants:TraesCS2D01G587100.1 | TIGR:cd00412 | : |
Description
No Description!
Coordinates
chr2D:-:645009510..645012324
Molecular Weight (calculated)
23970.7 Da
IEP (calculated)
5.677
GRAVY (calculated)
-0.393
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQEDSTSAQ SRPAPKLNER ILSSLSRRAV AAHPWHDLEI GPGAPAVFNV VVEITKGSKV KYELDKKTGL IKVDRVLYSS VVYPHNYGFI PRTLCEDNDP
101: MDVLVLMQEP VIPGSFLRAR AIGLMPMIDQ GEKDDKIIAV CADDPEYRHY NDISELSPHR LQEIKRFFED YKKNENKEVA VDAFLPATTA REAIQYSMDL
201: YAQYILQSLR Q
101: MDVLVLMQEP VIPGSFLRAR AIGLMPMIDQ GEKDDKIIAV CADDPEYRHY NDISELSPHR LQEIKRFFED YKKNENKEVA VDAFLPATTA REAIQYSMDL
201: YAQYILQSLR Q
001: MSEEAYEETQ ESSQSPRPVP KLNERILSTL SRRSVAAHPW HDLEIGPEAP LVFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR
Arabidopsis Description
PPA3PPa3 [Source:UniProtKB/TrEMBL;Acc:A0A178VZ15]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.