Factsheet for TraesCS3D01G539900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G116580.1	Barley	cytosol	93.3	90.87
TraesCS1D01G040000.1	Wheat	cytosol	83.93	86.64
VIT_08s0040g02470.t01	Wine grape	cytosol	80.8	83.8
GSMUA_Achr6P15350_001	Banana	unclear	80.36	83.72
TraesCS3D01G540100.1	Wheat	cytosol, plastid	97.32	82.89
Solyc09g010380.2.1	Tomato	cytosol	79.46	82.41
Bra039808.1-P	Field mustard	cytosol	79.46	82.03
CDX73537	Canola	cytosol	79.46	82.03
CDX78192	Canola	cytosol	79.46	82.03
PGSC0003DMT400023069	Potato	cytosol	79.02	81.94
AT3G53620.1	Thale cress	cytosol	78.57	81.48
Bra007016.1-P	Field mustard	cytosol	78.57	81.11
KRH32318	Soybean	cytosol	77.68	80.56
KRH19727	Soybean	cytosol	77.68	80.56
TraesCS6D01G252400.1	Wheat	cytosol	74.55	78.04
TraesCS1D01G344800.2	Wheat	cytosol	70.98	77.56
TraesCS2D01G587100.1	Wheat	cytosol	72.32	76.78
TraesCS1D01G273500.1	Wheat	cytosol	73.21	75.93
KRG95822	Soybean	cytosol	76.79	75.11
KRH67552	Soybean	cytosol	77.23	74.89
GSMUA_Achr3P17710_001	Banana	cytosol, extracellular	54.46	70.93
HORVU3Hr1G116650.3	Barley	cytosol, endoplasmic reticulum	94.2	66.14
TraesCS6D01G308400.1	Wheat	plastid	28.57	22.3

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649
HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF40	InterPro:Pyrophosphatase
InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	EnsemblPlantsGene:TraesCS3D01G539900	EnsemblPlants:TraesCS3D01G539900.1	TIGR:cd00412	SEG:seg

Description

No Description!

Coordinates

chr3D:+:611557940..611559750

Molecular Weight (calculated)

25109.0 Da

IEP (calculated)

5.367

GRAVY (calculated)

-0.338

Length

224 amino acids

Sequence
(BLAST)

001: MAPSQQVAAT KEPSANGTAA PAPKTKTPAL NERILSSITR RSVAAHPWHD LEIGPDAPTI FNCVIEIPKG SKVKYELDKK TGLIKVDRVL YSSVVYPHNY
101: GFIPRTLCDD SDPIDVLVIM QEPVVPGCFL RAKAIGLMPM IDQGEADDKI IAVCADDPEY RHFNDIKDLP PHRLAEIRRF FEDYKKNENK EVAVNDFLPS
201: EDAYEAIQHS MDLYATYIVE GLRR

Best Arabidopsis Sequence Match ( AT3G53620.1 )
(BLAST)

001: MAPPIEVSTK SYVEKHVSLP TLNERILSSM SHRSVAAHPW HDLEIGPEAP IIFNCVVEIG KGSKVKYELD KTTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDSDPIDVLV IMQEPVIPGC FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LPPHRMAEIR RFFEDYKKNE NKEVAVNDFL PATAAYDAVQ
201: HSMDLYADYV VENLRR

Arabidopsis Description

PPA4PPa4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.