Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G273500.1 | Wheat | cytosol | 99.54 | 99.54 |
| TraesCS1B01G283300.1 | Wheat | cytosol | 98.61 | 98.61 |
| HORVU1Hr1G075110.1 | Barley | plastid | 92.59 | 86.21 |
| GSMUA_Achr3P22500_001 | Banana | cytosol | 83.8 | 85.38 |
| Bra032616.1-P | Field mustard | cytosol | 80.09 | 85.22 |
| GSMUA_Achr7P03170_001 | Banana | cytosol | 83.33 | 84.91 |
| Zm00001d010171_P002 | Maize | cytosol, extracellular | 87.96 | 84.82 |
| TraesCS2D01G587100.1 | Wheat | cytosol | 82.41 | 84.36 |
| GSMUA_Achr8P07910_001 | Banana | cytosol | 82.41 | 83.96 |
| GSMUA_Achr6P19560_001 | Banana | cytosol | 81.94 | 83.49 |
| AT1G01050.1 | Thale cress | cytosol | 81.48 | 83.02 |
| Bra033292.1-P | Field mustard | cytosol | 81.48 | 83.02 |
| PGSC0003DMT400015012 | Potato | cytosol | 73.15 | 82.72 |
| KRH47754 | Soybean | cytosol | 81.02 | 82.55 |
| KRG97263 | Soybean | cytosol | 80.09 | 81.99 |
| KRH68981 | Soybean | cytosol | 79.63 | 81.52 |
| TraesCS1D01G344800.2 | Wheat | cytosol | 77.31 | 81.46 |
| Solyc08g083370.2.1 | Tomato | cytosol | 77.31 | 81.46 |
| Os05t0438500-01 | Rice | cytosol | 84.26 | 81.25 |
| PGSC0003DMT400012843 | Potato | extracellular | 79.17 | 81.04 |
| EES18298 | Sorghum | cytosol | 85.65 | 80.79 |
| Bra037416.1-P | Field mustard | cytosol | 79.63 | 80.37 |
| Bra008551.1-P | Field mustard | cytosol | 79.63 | 80.37 |
| Solyc12g055830.1.1 | Tomato | extracellular | 79.17 | 80.28 |
| AT2G46860.1 | Thale cress | cytosol | 80.09 | 80.09 |
| AT4G01480.1 | Thale cress | cytosol | 79.63 | 79.63 |
| Bra040479.1-P | Field mustard | cytosol | 79.17 | 79.17 |
| Solyc08g013680.2.1 | Tomato | cytosol | 39.81 | 77.48 |
| VIT_02s0025g02980.t01 | Wine grape | cytosol | 75.93 | 76.64 |
| TraesCS6D01G252400.1 | Wheat | cytosol | 75.93 | 76.64 |
| PGSC0003DMT400031865 | Potato | cytosol | 74.54 | 75.94 |
| KRG98973 | Soybean | cytosol | 68.06 | 75.0 |
| CDY69447 | Canola | cytosol | 27.31 | 74.68 |
| KRH06335 | Soybean | cytosol | 75.93 | 73.54 |
| TraesCS3D01G539900.1 | Wheat | cytosol | 75.93 | 73.21 |
| TraesCS1D01G040000.1 | Wheat | cytosol | 71.3 | 70.97 |
| KRG88877 | Soybean | cytosol | 35.65 | 66.96 |
| KRH72403 | Soybean | cytosol | 40.74 | 65.19 |
| KRG99305 | Soybean | cytosol | 58.33 | 62.69 |
| TraesCS3D01G540100.1 | Wheat | cytosol, plastid | 75.93 | 62.36 |
| GSMUA_Achr5P26130_001 | Banana | plastid | 81.94 | 60.82 |
| HORVU6Hr1G058900.2 | Barley | cytosol | 42.59 | 51.11 |
| HORVU2Hr1G065020.1 | Barley | cytosol | 29.17 | 45.65 |
| TraesCS6D01G308400.1 | Wheat | plastid | 27.31 | 20.56 |
Protein Annotations
| KEGG:00190+3.6.1.1 | Gene3D:3.90.80.10 | MapMan:35.1 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004427 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006796 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR036649 |
| HAMAP:MF_00209 | PFAM:PF00719 | ScanProsite:PS00387 | PANTHER:PTHR10286 | PANTHER:PTHR10286:SF10 | InterPro:Pyrophosphatase |
| InterPro:Pyrophosphatase_sf | SUPFAM:SSF50324 | EnsemblPlantsGene:TraesCS1D01G273500 | EnsemblPlants:TraesCS1D01G273500.1 | TIGR:cd00412 | SEG:seg |
Description
No Description!
Coordinates
chr1D:+:367847757..367849071
Molecular Weight (calculated)
24524.4 Da
IEP (calculated)
6.312
GRAVY (calculated)
-0.453
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQDKAAGEK AAAEPKRQTP RLNERILSSL SRRSVAAHPW HDLEIGPGAP AVFNVVVEIT KGSKVKYELD KKTGMIKVDR ILYSSVVYPH NYGFVPRTLC
101: EDNDPIDVLV LMQEPVLPGT FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYHNLNHLSE LSPHRLQEIR RFFEDYKKNE NKEVAVNDFL PADDARAAIQ
201: HSMDLYAEYI MHSLRQ
101: EDNDPIDVLV LMQEPVLPGT FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYHNLNHLSE LSPHRLQEIR RFFEDYKKNE NKEVAVNDFL PADDARAAIQ
201: HSMDLYAEYI MHSLRQ
001: MNGEEVKTSQ PQKKLQNPTP RLNERILSSL SKRSVAAHPW HDLEIGPGAP VIFNVVIEIS KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFVPRTLC
101: EDNDPIDVLV IMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCVDDP EYKHITNINE LPPHRLSEIR RFFEDYKKNE NKEVAVNDFL QPGPAIEAIQ
201: YSMDLYAEYI LHTLRR
101: EDNDPIDVLV IMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCVDDP EYKHITNINE LPPHRLSEIR RFFEDYKKNE NKEVAVNDFL QPGPAIEAIQ
201: YSMDLYAEYI LHTLRR
Arabidopsis Description
PPA5PPa5 [Source:UniProtKB/TrEMBL;Acc:A0A178V127]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.