Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G065020.1 | Barley | cytosol | 57.78 | 75.36 |
| CDY69447 | Canola | cytosol | 27.22 | 62.03 |
| KRG88877 | Soybean | cytosol | 28.89 | 45.22 |
| TraesCS1D01G273500.1 | Wheat | cytosol | 51.11 | 42.59 |
| TraesCS1B01G283300.1 | Wheat | cytosol | 51.11 | 42.59 |
| TraesCS1A01G273500.1 | Wheat | cytosol | 51.11 | 42.59 |
| PGSC0003DMT400015012 | Potato | cytosol | 45.0 | 42.41 |
| KRH72403 | Soybean | cytosol | 31.67 | 42.22 |
| HORVU1Hr1G075110.1 | Barley | plastid | 53.33 | 41.38 |
| Zm00001d010171_P002 | Maize | cytosol, extracellular | 50.0 | 40.18 |
| GSMUA_Achr3P22500_001 | Banana | cytosol | 47.22 | 40.09 |
| Bra032616.1-P | Field mustard | cytosol | 45.0 | 39.9 |
| GSMUA_Achr6P19560_001 | Banana | cytosol | 46.67 | 39.62 |
| KRH47754 | Soybean | cytosol | 46.67 | 39.62 |
| GSMUA_Achr7P03170_001 | Banana | cytosol | 46.67 | 39.62 |
| Solyc08g083370.2.1 | Tomato | cytosol | 45.0 | 39.51 |
| PGSC0003DMT400012843 | Potato | extracellular | 46.11 | 39.34 |
| KRH68981 | Soybean | cytosol | 46.11 | 39.34 |
| KRG97263 | Soybean | cytosol | 46.11 | 39.34 |
| Bra033292.1-P | Field mustard | cytosol | 46.11 | 39.15 |
| AT1G01050.1 | Thale cress | cytosol | 46.11 | 39.15 |
| Solyc12g055830.1.1 | Tomato | extracellular | 46.11 | 38.97 |
| GSMUA_Achr8P07910_001 | Banana | cytosol | 45.56 | 38.68 |
| AT2G46860.1 | Thale cress | cytosol | 46.11 | 38.43 |
| Os05t0438500-01 | Rice | cytosol | 47.78 | 38.39 |
| PGSC0003DMT400031865 | Potato | cytosol | 45.0 | 38.21 |
| EES18298 | Sorghum | cytosol | 48.33 | 37.99 |
| Bra040479.1-P | Field mustard | cytosol | 45.56 | 37.96 |
| Bra008551.1-P | Field mustard | cytosol | 45.0 | 37.85 |
| Bra037416.1-P | Field mustard | cytosol | 45.0 | 37.85 |
| AT4G01480.1 | Thale cress | cytosol | 45.0 | 37.5 |
| KRG99305 | Soybean | cytosol | 41.11 | 36.82 |
| KRG98973 | Soybean | cytosol | 39.44 | 36.22 |
| VIT_02s0025g02980.t01 | Wine grape | cytosol | 41.67 | 35.05 |
| KRH06335 | Soybean | cytosol | 42.78 | 34.53 |
| HORVU6Hr1G068760.1 | Barley | cytosol | 40.56 | 34.11 |
| HORVU1Hr1G075660.1 | Barley | cytosol | 42.22 | 33.48 |
| HORVU3Hr1G116580.1 | Barley | cytosol | 42.78 | 33.48 |
| HORVU1Hr1G005920.4 | Barley | cytosol, plastid | 39.44 | 29.71 |
| HORVU7Hr1G085380.2 | Barley | plastid | 21.11 | 29.46 |
| GSMUA_Achr5P26130_001 | Banana | plastid | 46.11 | 28.52 |
| Solyc08g013680.2.1 | Tomato | cytosol | 15.0 | 24.32 |
| HORVU3Hr1G116650.3 | Barley | cytosol, endoplasmic reticulum | 42.22 | 23.82 |
| HORVU6Hr1G080160.1 | Barley | plastid | 16.67 | 10.45 |
Protein Annotations
| KEGG:00190+3.6.1.1 | Gene3D:3.90.80.10 | MapMan:35.1 | UniProt:A0A287UB75 | GO:GO:0000287 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004427 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006796 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| EnsemblPlantsGene:HORVU6Hr1G058900 | EnsemblPlants:HORVU6Hr1G058900.2 | InterPro:IPR036649 | PANTHER:PTHR10286 | PANTHER:PTHR10286:SF10 | InterPro:Pyrophosphatase |
| InterPro:Pyrophosphatase_sf | SUPFAM:SSF50324 | UniParc:UPI000B47031D | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr6H:+:387091745..387092776
Molecular Weight (calculated)
19737.6 Da
IEP (calculated)
9.121
GRAVY (calculated)
-0.292
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: ASFLVGSRMS QDNGAKGHAA DEKEAAEPKR QKPPLNERIL SSLSQRSVTA HPWYDLEIGP RAPTVFNVVV EITKGSKVKY ELDKKIVIVS VRFTGSSTRP
101: WCTLTTTVSS RAPSARTTTP STSSSSWRCE PVLPGTFLRA RAIGLMPMID QGEKDAFCIC RSRGGCHFES ISCVIELLEH
101: WCTLTTTVSS RAPSARTTTP STSSSSWRCE PVLPGTFLRA RAIGLMPMID QGEKDAFCIC RSRGGCHFES ISCVIELLEH
001: MSEEAYEETQ ESSQSPRPVP KLNERILSTL SRRSVAAHPW HDLEIGPEAP LVFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR
Arabidopsis Description
PPA3PPa3 [Source:UniProtKB/TrEMBL;Acc:A0A178VZ15]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.