Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
23128297
golgi: 25769308 |
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G587100.1 | Wheat | cytosol | 96.76 | 99.05 |
| TraesCS2B01G611000.2 | Wheat | cytosol | 99.07 | 98.62 |
| Os04t0687100-01 | Rice | cytosol, plasma membrane | 94.44 | 95.77 |
| KXG27493 | Sorghum | cytosol | 93.06 | 93.93 |
| Zm00001d026680_P003 | Maize | cytosol | 93.06 | 93.93 |
| GSMUA_Achr3P22500_001 | Banana | cytosol | 87.04 | 88.68 |
| GSMUA_Achr7P03170_001 | Banana | cytosol | 87.04 | 88.68 |
| GSMUA_Achr8P07910_001 | Banana | cytosol | 86.11 | 87.74 |
| GSMUA_Achr6P19560_001 | Banana | cytosol | 86.11 | 87.74 |
| PGSC0003DMT400015012 | Potato | cytosol | 77.31 | 87.43 |
| Solyc08g083370.2.1 | Tomato | cytosol | 81.48 | 85.85 |
| Bra032616.1-P | Field mustard | cytosol | 80.56 | 85.71 |
| KRH47754 | Soybean | cytosol | 82.41 | 83.96 |
| AT1G01050.1 | Thale cress | cytosol | 81.94 | 83.49 |
| Solyc12g055830.1.1 | Tomato | extracellular | 81.94 | 83.1 |
| Bra033292.1-P | Field mustard | cytosol | 81.48 | 83.02 |
| PGSC0003DMT400012843 | Potato | extracellular | 81.02 | 82.94 |
| Solyc08g013680.2.1 | Tomato | cytosol | 42.59 | 82.88 |
| TraesCS1A01G273500.1 | Wheat | cytosol | 81.94 | 81.94 |
| AT2G46860.1 | Thale cress | cytosol | 81.94 | 81.94 |
| Bra037416.1-P | Field mustard | cytosol | 81.02 | 81.78 |
| Bra040479.1-P | Field mustard | cytosol | 81.48 | 81.48 |
| Bra008551.1-P | Field mustard | cytosol | 80.56 | 81.31 |
| KRG97263 | Soybean | cytosol | 79.17 | 81.04 |
| KRH68981 | Soybean | cytosol | 79.17 | 81.04 |
| TraesCS1A01G342700.1 | Wheat | cytosol | 75.93 | 80.0 |
| TraesCS6A01G272300.1 | Wheat | cytosol | 79.17 | 79.91 |
| PGSC0003DMT400031865 | Potato | cytosol | 78.24 | 79.72 |
| Zm00001d002889_P002 | Maize | cytosol | 93.06 | 79.45 |
| VIT_02s0025g02980.t01 | Wine grape | cytosol | 77.78 | 78.5 |
| AT4G01480.1 | Thale cress | cytosol | 77.31 | 77.31 |
| CDY69447 | Canola | cytosol | 28.24 | 77.22 |
| KRG98973 | Soybean | cytosol | 68.06 | 75.0 |
| KRH06335 | Soybean | cytosol | 76.85 | 74.44 |
| TraesCS1A01G038300.1 | Wheat | cytosol | 73.15 | 72.81 |
| TraesCS3A01G534500.1 | Wheat | cytosol, plastid | 76.39 | 69.62 |
| TraesCS3A01G534700.1 | Wheat | plastid | 76.39 | 69.62 |
| Os01t0322300-00 | Rice | cytosol | 23.61 | 68.92 |
| KRG88877 | Soybean | cytosol | 36.11 | 67.83 |
| KRH72403 | Soybean | cytosol | 40.28 | 64.44 |
| KRG99305 | Soybean | cytosol | 59.26 | 63.68 |
| GSMUA_Achr5P26130_001 | Banana | plastid | 84.26 | 62.54 |
| TraesCS6A01G329500.1 | Wheat | golgi | 27.31 | 20.56 |
Protein Annotations
| KEGG:00190+3.6.1.1 | Gene3D:3.90.80.10 | MapMan:35.1 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004427 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006796 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR036649 |
| HAMAP:MF_00209 | PFAM:PF00719 | ScanProsite:PS00387 | PANTHER:PTHR10286 | PANTHER:PTHR10286:SF22 | InterPro:Pyrophosphatase |
| InterPro:Pyrophosphatase_sf | SUPFAM:SSF50324 | EnsemblPlantsGene:TraesCS2A01G576400 | EnsemblPlants:TraesCS2A01G576400.1 | TIGR:cd00412 | : |
Description
No Description!
Coordinates
chr2A:-:770358266..770361267
Molecular Weight (calculated)
24440.2 Da
IEP (calculated)
5.372
GRAVY (calculated)
-0.394
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEEDSTSAA AQQPTSRPAP KLNERILSSL SRRAVAAHPW HDLEIGPGAP AVFNVVVEIT KGSKVKYELD KKTGLIKVDR VLYSSVVYPH NYGFIPRTLC
101: EDNDPMDVLV LMQEPVIPGS FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LSPHRLQEIK RFFEDYKKNE NKEVAVDAFL PATTAREAIQ
201: YSMDLYAQYI LQSLRQ
101: EDNDPMDVLV LMQEPVIPGS FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LSPHRLQEIK RFFEDYKKNE NKEVAVDAFL PATTAREAIQ
201: YSMDLYAQYI LQSLRQ
001: MSEEAYEETQ ESSQSPRPVP KLNERILSTL SRRSVAAHPW HDLEIGPEAP LVFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR
Arabidopsis Description
PPA3PPa3 [Source:UniProtKB/TrEMBL;Acc:A0A178VZ15]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.