Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026680_P003 | Maize | cytosol | 83.0 | 98.13 |
| KXG27493 | Sorghum | cytosol | 82.21 | 97.2 |
| Os04t0687100-01 | Rice | cytosol, plasma membrane | 80.63 | 95.77 |
| TraesCS2D01G587100.1 | Wheat | cytosol | 79.45 | 95.26 |
| TraesCS2A01G576400.1 | Wheat | golgi | 79.45 | 93.06 |
| TraesCS2B01G611000.2 | Wheat | cytosol | 78.66 | 91.71 |
| GSMUA_Achr7P03170_001 | Banana | cytosol | 73.91 | 88.21 |
| GSMUA_Achr3P22500_001 | Banana | cytosol | 73.52 | 87.74 |
| PGSC0003DMT400015012 | Potato | cytosol | 66.01 | 87.43 |
| GSMUA_Achr8P07910_001 | Banana | cytosol | 73.12 | 87.26 |
| GSMUA_Achr6P19560_001 | Banana | cytosol | 72.73 | 86.79 |
| Bra032616.1-P | Field mustard | cytosol | 68.77 | 85.71 |
| Solyc08g083370.2.1 | Tomato | cytosol | 69.17 | 85.37 |
| Zm00001d010171_P002 | Maize | cytosol, extracellular | 74.31 | 83.93 |
| AT1G01050.1 | Thale cress | cytosol | 69.96 | 83.49 |
| TraesCS3B01G077900.2 | Wheat | plastid | 78.66 | 83.26 |
| Solyc12g055830.1.1 | Tomato | extracellular | 69.96 | 83.1 |
| Bra033292.1-P | Field mustard | cytosol | 69.57 | 83.02 |
| PGSC0003DMT400012843 | Potato | extracellular | 69.17 | 82.94 |
| Solyc08g013680.2.1 | Tomato | cytosol | 36.36 | 82.88 |
| KRH47754 | Soybean | cytosol | 69.17 | 82.55 |
| AT2G46860.1 | Thale cress | cytosol | 69.57 | 81.48 |
| Bra008551.1-P | Field mustard | cytosol | 68.77 | 81.31 |
| Bra037416.1-P | Field mustard | cytosol | 68.77 | 81.31 |
| Zm00001d051564_P001 | Maize | cytosol | 61.66 | 81.25 |
| Bra040479.1-P | Field mustard | cytosol | 69.17 | 81.02 |
| KRH68981 | Soybean | cytosol | 67.19 | 80.57 |
| KRG97263 | Soybean | cytosol | 67.19 | 80.57 |
| VIT_02s0025g02980.t01 | Wine grape | cytosol | 67.19 | 79.44 |
| PGSC0003DMT400031865 | Potato | cytosol | 66.4 | 79.25 |
| AT4G01480.1 | Thale cress | cytosol | 66.01 | 77.31 |
| CDY69447 | Canola | cytosol | 23.72 | 75.95 |
| KRG98973 | Soybean | cytosol | 58.5 | 75.51 |
| Zm00001d035616_P001 | Maize | cytosol | 65.61 | 75.45 |
| KRH06335 | Soybean | cytosol | 64.43 | 73.09 |
| KRG88877 | Soybean | cytosol | 31.62 | 69.57 |
| Os01t0322300-00 | Rice | cytosol | 20.16 | 68.92 |
| KRH72403 | Soybean | cytosol | 34.39 | 64.44 |
| KRG99305 | Soybean | cytosol | 50.59 | 63.68 |
| GSMUA_Achr5P26130_001 | Banana | plastid | 71.94 | 62.54 |
| Zm00001d017770_P001 | Maize | mitochondrion | 66.8 | 53.31 |
| Zm00001d018197_P001 | Maize | plastid | 24.11 | 21.18 |
Protein Annotations
| KEGG:00190+3.6.1.1 | Gene3D:3.90.80.10 | MapMan:35.1 | EntrezGene:541666 | UniProt:A0A1D6E511 | GO:GO:0000287 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004427 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006796 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | InterPro:IPR036649 | HAMAP:MF_00209 | ProteinID:ONM15587.1 | PFAM:PF00719 | ScanProsite:PS00387 |
| PANTHER:PTHR10286 | PANTHER:PTHR10286:SF22 | InterPro:Pyrophosphatase | InterPro:Pyrophosphatase_sf | SUPFAM:SSF50324 | UniParc:UPI0008450017 |
| EnsemblPlantsGene:Zm00001d002889 | EnsemblPlants:Zm00001d002889_P002 | EnsemblPlants:Zm00001d002889_T002 | : | : | : |
Description
Soluble inorganic pyrophosphatase
Coordinates
chr2:+:25913912..25921339
Molecular Weight (calculated)
28643.3 Da
IEP (calculated)
4.833
GRAVY (calculated)
-0.276
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEEDKTAAS AEQPKRAPKL NERILSSLSR RSVAAHPWHD LEIGPDAPAV FNVVSTSITL EPFDVLYVRC CGDLGCLEPS TGSDCIIYIF MQVVEITKGS
101: KVKYELDKKT GLIKVDRVLY SSVVYPHNYG FVPRTLCEDN DPMDVLVLMQ EPVVPGSFLR ARAIGLMPMI DQGEKDDKII AVCADDPEYR HYNDISELSP
201: HRLQEIKRFF EDYKKNENKE VAVDAFLPAT TAREAIQYSM DLYAQYILQS LRQ
101: KVKYELDKKT GLIKVDRVLY SSVVYPHNYG FVPRTLCEDN DPMDVLVLMQ EPVVPGSFLR ARAIGLMPMI DQGEKDDKII AVCADDPEYR HYNDISELSP
201: HRLQEIKRFF EDYKKNENKE VAVDAFLPAT TAREAIQYSM DLYAQYILQS LRQ
001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR
Arabidopsis Description
PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.