Factsheet for GSMUA_Achr6P15350_001

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 3
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

unclear: 20177697

msms PMID: 20177697 doi

A Vertommen, B Panis, R Swennen, SC Carpentier

Division of Crop Biotechnics, Department of Biosystems, K U Leuven, Leuven, Belgium. Annelies.vertommen@biw.kuleuven.be

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	91.63	91.63
EES18902	Sorghum	cytosol	86.51	86.92
Os05t0114000-01	Rice	cytosol	86.98	86.57
Zm00001d035616_P001	Maize	cytosol	88.37	86.36
Os01t0974800-01	Rice	cytosol	86.05	85.25
GSMUA_Achr3P22500_001	Banana	cytosol	81.86	83.02
TraesCS1D01G040000.1	Wheat	cytosol	83.72	82.95
TraesCS1A01G038300.1	Wheat	cytosol	83.26	82.49
TraesCS1B01G049200.1	Wheat	cytosol	83.26	82.49
GSMUA_Achr6P19560_001	Banana	cytosol	80.47	81.6
GSMUA_Achr7P03170_001	Banana	cytosol	80.47	81.6
TraesCS3D01G539900.1	Wheat	cytosol	83.72	80.36
GSMUA_Achr8P07910_001	Banana	cytosol	78.6	79.72
HORVU3Hr1G116580.1	Barley	cytosol	84.19	78.7
TraesCS3B01G611800.1	Wheat	cytosol	83.26	78.51
TraesCS3B01G611600.1	Wheat	golgi	83.26	76.82
TraesCS3A01G534700.1	Wheat	plastid	83.72	75.95
TraesCS3A01G534500.1	Wheat	cytosol, plastid	83.26	75.53
HORVU1Hr1G005920.4	Barley	cytosol, plastid	83.72	75.31
GSMUA_Achr3P17710_001	Banana	cytosol, extracellular	59.07	73.84
TraesCS3D01G540100.1	Wheat	cytosol, plastid	82.79	67.68
GSMUA_Achr5P26130_001	Banana	plastid	79.53	58.76
GSMUA_Achr5P23650_001	Banana	extracellular	79.53	56.81
HORVU3Hr1G116650.3	Barley	cytosol, endoplasmic reticulum	83.26	56.11
GSMUA_Achr9P26260_001	Banana	cytosol	21.86	25.82
GSMUA_Achr6P30130_001	Banana	cytosol	21.86	25.82

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G15350_001
EnsemblPlants:GSMUA_Achr6P15350_001	EnsemblPlants:GSMUA_Achr6T15350_001	InterPro:IPR036649	UniProt:M0T783	HAMAP:MF_00209	PFAM:PF00719
ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF40	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324
UniParc:UPI000296A565	:	:	:	:	:

Description

Soluble inorganic pyrophosphatase [Source:GMGC_GENE;Acc:GSMUA_Achr6G15350_001]

Coordinates

chr6:-:10228012..10232082

Molecular Weight (calculated)

24513.5 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.361

Length

215 amino acids

Sequence
(BLAST)

001: MAPPLQASTK ASDFQLSRSP LNERILSSMS RRSVAAHPWH DLEIGPAAPK IFNCVVEITR GSKVKYELDK KTGLIKVDRV LYSSVVYPHN YGFIPRTLCE
101: DNDPMDVLVI MQEPVIPGCF LRAKAIGLMP MIDQGEKDDK IIAVCADDPE YKHYNDIKEL PPHRLAEIRR FFEDYKKNEN KEVAVNDFLP ASSAYEAIQH
201: SMDLYANYIV ESLRR

Best Arabidopsis Sequence Match ( AT3G53620.1 )
(BLAST)

001: MAPPIEVSTK SYVEKHVSLP TLNERILSSM SHRSVAAHPW HDLEIGPEAP IIFNCVVEIG KGSKVKYELD KTTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDSDPIDVLV IMQEPVIPGC FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LPPHRMAEIR RFFEDYKKNE NKEVAVNDFL PATAAYDAVQ
201: HSMDLYADYV VENLRR

Arabidopsis Description

PPA4PPa4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.