Factsheet for GSMUA_Achr5P23650_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051564_P001	Maize	cytosol	56.81	89.06
KXG30923	Sorghum	cytosol	59.8	87.38
Os02t0704900-02	Rice	plasma membrane, plastid	59.8	84.11
TraesCS6D01G252400.1	Wheat	cytosol	59.47	83.64
TraesCS6A01G272300.1	Wheat	cytosol	59.47	83.64
HORVU6Hr1G068760.1	Barley	cytosol	59.47	83.64
TraesCS6B01G299800.1	Wheat	cytosol	59.14	83.18
VIT_04s0023g02050.t01	Wine grape	cytosol	58.8	82.33
PGSC0003DMT400009045	Potato	cytosol	58.47	82.24
KRH76757	Soybean	cytosol	57.14	80.75
KRH28709	Soybean	nucleus	56.81	80.28
GSMUA_Achr7P03170_001	Banana	cytosol	56.15	79.72
GSMUA_Achr6P15350_001	Banana	unclear	56.81	79.53
GSMUA_Achr8P07910_001	Banana	cytosol	55.81	79.25
GSMUA_Achr10P...	Banana	cytosol	56.48	79.07
GSMUA_Achr3P22500_001	Banana	cytosol	55.15	78.3
GSMUA_Achr6P19560_001	Banana	cytosol	54.49	77.36
CDY46306	Canola	cytosol	52.49	72.15
AT2G18230.1	Thale cress	cytosol	52.16	72.02
CDY64108	Canola	cytosol	52.16	71.69
CDY30321	Canola	cytosol	52.16	71.69
Bra037229.1-P	Field mustard	cytosol	52.16	71.69
GSMUA_Achr3P17710_001	Banana	cytosol, extracellular	39.53	69.19
CDY25149	Canola	cytosol	52.82	68.24
Solyc02g085050.2.1	Tomato	cytosol	60.47	67.91
Zm00001d017770_P001	Maize	mitochondrion	59.8	56.78
GSMUA_Achr5P26130_001	Banana	plastid	54.82	56.7
GSMUA_Achr9P26260_001	Banana	cytosol	14.95	24.73
GSMUA_Achr6P30130_001	Banana	cytosol	14.62	24.18
Bra039627.1-P	Field mustard	plastid	54.15	23.9

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr5G23650_001
EnsemblPlants:GSMUA_Achr5P23650_001	EnsemblPlants:GSMUA_Achr5T23650_001	InterPro:IPR036649	UniProt:M0T140	HAMAP:MF_00209	PFAM:PF00719
ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF40	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324
SignalP:SignalP-noTM	UniParc:UPI0002960AC7	:	:	:	:

Description

Soluble inorganic pyrophosphatase [Source:GMGC_GENE;Acc:GSMUA_Achr5G23650_001]

Coordinates

chr5:-:25326996..25332715

Molecular Weight (calculated)

33856.1 Da

IEP (calculated)

6.173

GRAVY (calculated)

-0.051

Length

301 amino acids

Sequence
(BLAST)

001: MALILLPPFV HSCCVLGAYL ACLGRNKILA QQTGPSQNFP NPSLPNTPKP FGQLLLSYCC HYYESKLLLW TSIVLPTDAA VRLFLHHLDM AAEADGRGTT
101: TFQHIALNER ILSSMMRKSV AAHPWHDLEI GPGAPAVFNC VVEIARGSKV KYELDKASGL IKVDRVLYSS VVYPHNYGFI PRTLCEDGDP MDVLVLMQEQ
201: VVPGCFLRAR AIGLMPMIDQ GEKDDKIIAV CADDPEFRHY KDINDLPPHR LAEIRRFFED YKKNENKEVA VNDFLPAEDA IKAIEYSMDL YASYIIESLR
301: Q

Best Arabidopsis Sequence Match ( AT1G01050.1 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.