CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037229.1-P	Field mustard	cytosol	100.0	100.0
CDY30321	Canola	cytosol	100.0	100.0
CDY46306	Canola	cytosol	97.26	97.26
AT2G18230.1	Thale cress	cytosol	94.98	95.41
CDY25149	Canola	cytosol	97.26	91.42
KRH28709	Soybean	nucleus	78.08	80.28
KRH76757	Soybean	cytosol	77.17	79.34
VIT_04s0023g02050.t01	Wine grape	cytosol	75.8	77.21
Zm00001d051564_P001	Maize	cytosol	67.58	77.08
PGSC0003DMT400009045	Potato	cytosol	73.97	75.7
CDX78192	Canola	cytosol	74.43	75.12
KXG30923	Sorghum	cytosol	70.32	74.76
CDY55328	Canola	cytosol	70.32	74.76
CDX73537	Canola	cytosol	73.97	74.65
CDY32448	Canola	cytosol	69.86	74.27
Os02t0704900-02	Rice	plasma membrane, plastid	71.69	73.36
CDY15206	Canola	cytosol	69.86	73.21
TraesCS6D01G252400.1	Wheat	cytosol	71.23	72.9
HORVU6Hr1G068760.1	Barley	cytosol	71.23	72.9
TraesCS6A01G272300.1	Wheat	cytosol	71.23	72.9
TraesCS6B01G299800.1	Wheat	cytosol	70.78	72.43
CDX90003	Canola	cytosol	69.86	72.17
CDX97250	Canola	cytosol	69.86	71.5
CDY01933	Canola	cytosol	69.86	71.5
CDY07141	Canola	cytosol	68.95	70.56
CDY48009	Canola	cytosol	68.95	69.91
CDY27516	Canola	cytosol	68.95	69.91
Solyc02g085050.2.1	Tomato	cytosol	74.43	60.82
CDY69447	Canola	cytosol	21.46	59.49
GSMUA_Achr5P23650_001	Banana	extracellular	71.69	52.16
Zm00001d017770_P001	Maize	mitochondrion	68.95	47.63
CDY44812	Canola	cytosol	16.89	23.42
CDY71464	Canola	plastid	27.4	22.64
CDX81134	Canola	plastid	27.85	20.68
CDY56549	Canola	plastid	27.85	20.61
CDY21593	Canola	plastid	27.4	20.27
CDX69894	Canola	plastid	27.4	20.13
CDX85804	Canola	plastid	25.11	19.5
CDX81136	Canola	cytosol	4.57	13.16

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:A0A078GXT9	UniProt:A0A078GXT9	ProteinID:CDY30321.1
EnsemblPlants:CDY64108	ProteinID:CDY64108	ProteinID:CDY64108.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00040880001
InterPro:IPR036649	HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF40
InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	UniParc:UPI0002541ED2	:	:

Description

BnaCnng43100DBnaA09g09560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXT9]

Coordinates

chrLK034402:-:2589..4452

Molecular Weight (calculated)

24617.4 Da

IEP (calculated)

5.965

GRAVY (calculated)

-0.371

Length

219 amino acids

Sequence
(BLAST)

001: MADIKDEGTP KSSASSPLRN PNVTLNERNF AAFTHRSAAA HPWHDLEIGP EAPAVFNCVV EISKGGKVKY ELDKNSGLIK VDRVLYSSIV YPHNYGFIPR
101: TICEDSDPID VLVLMQEPVL TGSFLRARAI GLMPMIDQGE KDDKIIAVCA DDPEFRHYRD IKELPPHRLA EIRRFFEDYK KNENKKVDVE GFLPAQAAID
201: AIKDSMDLYA AYIKAGLQR

Best Arabidopsis Sequence Match ( AT2G18230.1 )
(BLAST)

001: MAEIKDEGSA KGYAFPLRNP NVTLNERNFA AFTHRSAAAH PWHDLEIGPE APTVFNCVVE ISKGGKVKYE LDKNSGLIKV DRVLYSSIVY PHNYGFIPRT
101: ICEDSDPMDV LVLMQEPVLT GSFLRARAIG LMPMIDQGEK DDKIIAVCAD DPEFRHYRDI KELPPHRLAE IRRFFEDYKK NENKKVDVEA FLPAQAAIDA
201: IKDSMDLYAA YIKAGLQR

Arabidopsis Description

PPA2PPa2 [Source:UniProtKB/TrEMBL;Acc:A0A178VY12]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.