Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56549 | Canola | plastid | 98.98 | 98.65 |
| Bra006029.1-P | Field mustard | plastid | 98.64 | 98.31 |
| CDY71464 | Canola | plastid | 86.78 | 96.6 |
| CDX69894 | Canola | plastid | 92.88 | 91.95 |
| CDY21593 | Canola | plastid | 92.2 | 91.89 |
| CDX85804 | Canola | plastid | 87.12 | 91.13 |
| AT5G09650.1 | Thale cress | mitochondrion | 91.53 | 90.0 |
| GSMUA_Achr9P26260_001 | Banana | cytosol | 54.58 | 88.46 |
| GSMUA_Achr6P30130_001 | Banana | cytosol | 54.24 | 87.91 |
| KRH10663 | Soybean | nucleus | 78.31 | 80.21 |
| CDY44812 | Canola | cytosol | 42.71 | 79.75 |
| KRH21683 | Soybean | nucleus | 77.29 | 79.17 |
| PGSC0003DMT400008028 | Potato | extracellular | 76.95 | 78.28 |
| Solyc01g106430.2.1 | Tomato | plastid | 76.61 | 77.93 |
| PGSC0003DMT400068875 | Potato | cytosol | 75.93 | 76.71 |
| Solyc10g047950.1.1 | Tomato | plastid | 75.59 | 75.85 |
| CDX81136 | Canola | cytosol | 18.31 | 71.05 |
| EES05862 | Sorghum | plastid | 69.15 | 70.83 |
| HORVU6Hr1G080160.1 | Barley | plastid | 68.81 | 70.73 |
| Zm00001d018197_P001 | Maize | plastid | 68.81 | 70.49 |
| TraesCS6D01G308400.1 | Wheat | plastid | 68.47 | 70.38 |
| TraesCS6B01G360300.1 | Wheat | plastid | 68.14 | 70.03 |
| TraesCS6A01G329500.1 | Wheat | golgi | 68.14 | 70.03 |
| Os02t0768600-01 | Rice | plastid | 67.8 | 68.03 |
| VIT_03s0088g01290.t01 | Wine grape | plastid | 32.54 | 64.0 |
| VIT_18s0001g08170.t01 | Wine grape | cytosol | 56.61 | 54.93 |
| CDY15206 | Canola | cytosol | 21.02 | 29.67 |
| CDY55328 | Canola | cytosol | 20.68 | 29.61 |
| CDY32448 | Canola | cytosol | 20.68 | 29.61 |
| CDX90003 | Canola | cytosol | 21.02 | 29.25 |
| CDX73537 | Canola | cytosol | 21.36 | 29.03 |
| CDX78192 | Canola | cytosol | 21.36 | 29.03 |
| CDY01933 | Canola | cytosol | 21.02 | 28.97 |
| CDX97250 | Canola | cytosol | 21.02 | 28.97 |
| CDY46306 | Canola | cytosol | 21.02 | 28.31 |
| CDY48009 | Canola | cytosol | 20.68 | 28.24 |
| CDY27516 | Canola | cytosol | 20.68 | 28.24 |
| CDY07141 | Canola | cytosol | 20.34 | 28.04 |
| CDY64108 | Canola | cytosol | 20.68 | 27.85 |
| CDY30321 | Canola | cytosol | 20.68 | 27.85 |
| CDY25149 | Canola | cytosol | 21.02 | 26.61 |
| CDY69447 | Canola | cytosol | 6.78 | 25.32 |
Protein Annotations
| KEGG:00190+3.6.1.1 | Gene3D:3.90.80.10 | MapMan:50.3.6 | GO:A0A078CYS5 | EnsemblPlants:CDX81134 | ProteinID:CDX81134 |
| ProteinID:CDX81134.1 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004427 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006796 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00134586001 | InterPro:IPR036649 | PFAM:PF00719 |
| ScanProsite:PS00387 | PANTHER:PTHR10286 | PANTHER:PTHR10286:SF39 | InterPro:Pyrophosphatase | InterPro:Pyrophosphatase_sf | SUPFAM:SSF50324 |
| UniParc:UPI0004EDC568 | : | : | : | : | : |
Description
BnaC03g03880D
Coordinates
chrLK031823:-:1880777..1882557
Molecular Weight (calculated)
32935.3 Da
IEP (calculated)
6.531
GRAVY (calculated)
-0.390
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATRVITAA SATSCFLAKR AFVLPAKRSC GGGALCFNRR ALVLKSKRPF SCSAIYNPQV KVKEEGQPET LDYRVFFLDG SGKKVSPWHD IPLTLGDGVY
101: NFIVEIPKES KAKMEVATDE DFTPIKQDTK KGKLRYYPYN INWNYGLLPQ TWEDPSQANA EVEGAFGDND PVDVVEIGET QRKIGEVLKI KPLAALAMID
201: EGELDWKIVA ISLDDPKAHL VNDVDDVEKH FPGTLTAIRD WFRDYKIPDG KPANRFGLGD KPANKEYALK IIHETNESWA KLVKRSVDPG DLSLF
101: NFIVEIPKES KAKMEVATDE DFTPIKQDTK KGKLRYYPYN INWNYGLLPQ TWEDPSQANA EVEGAFGDND PVDVVEIGET QRKIGEVLKI KPLAALAMID
201: EGELDWKIVA ISLDDPKAHL VNDVDDVEKH FPGTLTAIRD WFRDYKIPDG KPANRFGLGD KPANKEYALK IIHETNESWA KLVKRSVDPG DLSLF
001: MAATRVLTAA TAVTQTTSCF LAKQAFTLPA KKSCGGFGGL CFSRRALVLK SKRPFSCSAI YNPQVKVQEE GPAESLDYRV FFLDGSGKKV SPWHDIPLTL
101: GDGVFNFIVE IPKESKAKME VATDEDFTPI KQDTKKGKLR YYPYNINWNY GLLPQTWEDP SHANSEVEGC FGDNDPVDVV EIGETQRKIG DILKIKPLAA
201: LAMIDEGELD WKIVAISLDD PKAHLVNDVE DVEKHFPGTL TAIRDWFRDY KIPDGKPANR FGLGDKPANK DYALKIIQET NESWAKLVKR SVDAGDLSLY
101: GDGVFNFIVE IPKESKAKME VATDEDFTPI KQDTKKGKLR YYPYNINWNY GLLPQTWEDP SHANSEVEGC FGDNDPVDVV EIGETQRKIG DILKIKPLAA
201: LAMIDEGELD WKIVAISLDD PKAHLVNDVE DVEKHFPGTL TAIRDWFRDY KIPDGKPANR FGLGDKPANK DYALKIIQET NESWAKLVKR SVDAGDLSLY
Arabidopsis Description
PPA6Soluble inorganic pyrophosphatase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.