CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P26260_001	Banana	cytosol	61.84	25.82
GSMUA_Achr6P30130_001	Banana	cytosol	60.53	25.27
CDY44812	Canola	cytosol	46.05	22.15
CDY71464	Canola	plastid	68.42	19.62
CDY21593	Canola	plastid	73.68	18.92
CDX85804	Canola	plastid	69.74	18.79
CDX69894	Canola	plastid	73.68	18.79
KRH21683	Soybean	nucleus	69.74	18.4
KRH10663	Soybean	nucleus	69.74	18.4
CDX81134	Canola	plastid	71.05	18.31
CDY56549	Canola	plastid	71.05	18.24
PGSC0003DMT400068875	Potato	cytosol	69.74	18.15
PGSC0003DMT400008028	Potato	extracellular	68.42	17.93
Solyc10g047950.1.1	Tomato	plastid	68.42	17.69
Solyc01g106430.2.1	Tomato	plastid	65.79	17.24
EES05862	Sorghum	plastid	64.47	17.01
Zm00001d018197_P001	Maize	plastid	64.47	17.01
VIT_18s0001g08170.t01	Wine grape	cytosol	65.79	16.45
TraesCS6D01G308400.1	Wheat	plastid	61.84	16.38
TraesCS6A01G329500.1	Wheat	golgi	61.84	16.38
HORVU6Hr1G080160.1	Barley	plastid	61.84	16.38
TraesCS6B01G360300.1	Wheat	plastid	61.84	16.38
Os02t0768600-01	Rice	plastid	61.84	15.99
CDY55328	Canola	cytosol	18.42	6.8
CDY32448	Canola	cytosol	18.42	6.8
CDX90003	Canola	cytosol	18.42	6.6
CDY07141	Canola	cytosol	18.42	6.54
CDY01933	Canola	cytosol	18.42	6.54
CDX97250	Canola	cytosol	18.42	6.54
CDY48009	Canola	cytosol	18.42	6.48
CDY27516	Canola	cytosol	18.42	6.48
CDY15206	Canola	cytosol	17.11	6.22
CDX73537	Canola	cytosol	17.11	5.99
CDX78192	Canola	cytosol	17.11	5.99
CDY64108	Canola	cytosol	13.16	4.57
CDY46306	Canola	cytosol	13.16	4.57
CDY30321	Canola	cytosol	13.16	4.57
CDY25149	Canola	cytosol	13.16	4.29
CDY69447	Canola	cytosol	2.63	2.53
VIT_03s0088g01290.t01	Wine grape	plastid	1.32	0.67

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:A0A078CVI1	EnsemblPlants:CDX81136	ProteinID:CDX81136
ProteinID:CDX81136.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00134588001	InterPro:IPR036649	PFAM:PF00719
PANTHER:PTHR10286	PANTHER:PTHR10286:SF39	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	UniParc:UPI0004EC2340

Description

BnaC03g03900D

Coordinates

chrLK031823:-:1886177..1886599

Molecular Weight (calculated)

8688.2 Da

IEP (calculated)

5.065

GRAVY (calculated)

-0.587

Length

76 amino acids

Sequence
(BLAST)

1: MKTSLLLSKT LRRESSDIIR KYNINWNYGL LPQTWEDPSH ANVEVEGAFG DNDPVEVVEI GETQRKIGEV HKSSLF

Best Arabidopsis Sequence Match ( AT5G09650.1 )
(BLAST)

001: MAATRVLTAA TAVTQTTSCF LAKQAFTLPA KKSCGGFGGL CFSRRALVLK SKRPFSCSAI YNPQVKVQEE GPAESLDYRV FFLDGSGKKV SPWHDIPLTL
101: GDGVFNFIVE IPKESKAKME VATDEDFTPI KQDTKKGKLR YYPYNINWNY GLLPQTWEDP SHANSEVEGC FGDNDPVDVV EIGETQRKIG DILKIKPLAA
201: LAMIDEGELD WKIVAISLDD PKAHLVNDVE DVEKHFPGTL TAIRDWFRDY KIPDGKPANR FGLGDKPANK DYALKIIQET NESWAKLVKR SVDAGDLSLY

Arabidopsis Description

PPA6Soluble inorganic pyrophosphatase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.