Factsheet for GSMUA_Achr9P26260_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P30130_001	Banana	cytosol	93.96	93.96
CDX81136	Canola	cytosol	25.82	61.84
CDY71464	Canola	plastid	89.01	61.13
KRH21683	Soybean	nucleus	91.21	57.64
KRH10663	Soybean	nucleus	90.11	56.94
PGSC0003DMT400008028	Potato	extracellular	90.66	56.9
Solyc01g106430.2.1	Tomato	plastid	90.66	56.9
CDY44812	Canola	cytosol	48.9	56.33
PGSC0003DMT400068875	Potato	cytosol	90.11	56.16
Solyc10g047950.1.1	Tomato	plastid	90.11	55.78
CDY21593	Canola	plastid	89.56	55.07
TraesCS6A01G329500.1	Wheat	golgi	86.81	55.05
TraesCS6B01G360300.1	Wheat	plastid	86.81	55.05
TraesCS6D01G308400.1	Wheat	plastid	86.81	55.05
EES05862	Sorghum	plastid	86.81	54.86
Bra006029.1-P	Field mustard	plastid	89.01	54.73
HORVU6Hr1G080160.1	Barley	plastid	86.26	54.7
CDX69894	Canola	plastid	89.56	54.7
CDX81134	Canola	plastid	88.46	54.58
Zm00001d018197_P001	Maize	plastid	86.26	54.51
CDY56549	Canola	plastid	88.46	54.39
Bra009396.1-P	Field mustard	plastid	89.01	54.36
AT5G09650.1	Thale cress	mitochondrion	87.91	53.33
Os02t0768600-01	Rice	plastid	85.71	53.06
CDX85804	Canola	plastid	80.22	51.77
VIT_18s0001g08170.t01	Wine grape	cytosol	73.63	44.08
VIT_03s0088g01290.t01	Wine grape	plastid	34.62	42.0
GSMUA_Achr6P15350_001	Banana	unclear	25.82	21.86
GSMUA_Achr10P...	Banana	cytosol	25.82	21.86
GSMUA_Achr7P03170_001	Banana	cytosol	24.73	21.23
GSMUA_Achr3P22500_001	Banana	cytosol	24.73	21.23
GSMUA_Achr6P19560_001	Banana	cytosol	24.73	21.23
Bra028625.1-P	Field mustard	plastid	19.23	21.08
GSMUA_Achr8P07910_001	Banana	cytosol	24.18	20.75
GSMUA_Achr3P17710_001	Banana	cytosol, extracellular	15.93	16.86
GSMUA_Achr5P26130_001	Banana	plastid	24.73	15.46
GSMUA_Achr5P23650_001	Banana	extracellular	24.73	14.95

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:50.3.6	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr9G26260_001
EnsemblPlants:GSMUA_Achr9P26260_001	EnsemblPlants:GSMUA_Achr9T26260_001	InterPro:IPR036649	UniProt:M0U3N3	PFAM:PF00719	ScanProsite:PS00387
PANTHER:PTHR10286	PANTHER:PTHR10286:SF39	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	UniParc:UPI0002954FA8

Description

Soluble inorganic pyrophosphatase 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr9G26260_001]

Coordinates

chr9:+:30723794..30728875

Molecular Weight (calculated)

20325.0 Da

IEP (calculated)

4.539

GRAVY (calculated)

-0.471

Length

182 amino acids

Sequence
(BLAST)

001: MEVATDEPYT PIKQDTKKGK LRYYPYNINW NYGLLPQTWE DPSFANAEVE GALGDNDPVD VVEIGERQAK IGEILKVKPL AALAMIDEGE LDWKIVAISL
101: DDPRASLVND ADDVEKHFPG TLTAIRDWFR DYKIPDGKPA NRFGLGNKAA NKDYALKVIT ETNESWAKLM KRSVAAGELS LV

Best Arabidopsis Sequence Match ( AT5G09650.1 )
(BLAST)

001: MAATRVLTAA TAVTQTTSCF LAKQAFTLPA KKSCGGFGGL CFSRRALVLK SKRPFSCSAI YNPQVKVQEE GPAESLDYRV FFLDGSGKKV SPWHDIPLTL
101: GDGVFNFIVE IPKESKAKME VATDEDFTPI KQDTKKGKLR YYPYNINWNY GLLPQTWEDP SHANSEVEGC FGDNDPVDVV EIGETQRKIG DILKIKPLAA
201: LAMIDEGELD WKIVAISLDD PKAHLVNDVE DVEKHFPGTL TAIRDWFRDY KIPDGKPANR FGLGDKPANK DYALKIIQET NESWAKLVKR SVDAGDLSLY

Arabidopsis Description

PPA6Soluble inorganic pyrophosphatase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.