Factsheet for Solyc10g047950.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117
extracellular: 29876421

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068875	Potato	cytosol	93.88	94.52
GSMUA_Achr6P30130_001	Banana	cytosol	56.46	91.21
GSMUA_Achr9P26260_001	Banana	cytosol	55.78	90.11
Solyc01g106430.2.1	Tomato	plastid	81.29	82.41
CDY71464	Canola	plastid	72.79	80.75
Bra006029.1-P	Field mustard	plastid	76.19	75.68
CDX81134	Canola	plastid	75.85	75.59
CDY56549	Canola	plastid	75.85	75.34
Bra009396.1-P	Field mustard	plastid	76.19	75.17
CDY21593	Canola	plastid	75.51	75.0
KRH10663	Soybean	nucleus	73.47	75.0
CDX69894	Canola	plastid	75.85	74.83
KRH21683	Soybean	nucleus	73.13	74.65
CDX85804	Canola	plastid	70.75	73.76
AT5G09650.1	Thale cress	mitochondrion	73.81	72.33
Zm00001d018197_P001	Maize	plastid	70.41	71.88
CDY44812	Canola	cytosol	38.44	71.52
EES05862	Sorghum	plastid	69.73	71.18
TraesCS6D01G308400.1	Wheat	plastid	69.05	70.73
HORVU6Hr1G080160.1	Barley	plastid	68.71	70.38
TraesCS6A01G329500.1	Wheat	golgi	68.71	70.38
TraesCS6B01G360300.1	Wheat	plastid	68.71	70.38
CDX81136	Canola	cytosol	17.69	68.42
Os02t0768600-01	Rice	plastid	68.03	68.03
Bra028625.1-P	Field mustard	plastid	34.35	60.84
VIT_18s0001g08170.t01	Wine grape	cytosol	59.52	57.57
Solyc08g083370.2.1	Tomato	cytosol	20.75	29.76
Solyc12g055830.1.1	Tomato	extracellular	20.75	28.64
Solyc09g010380.2.1	Tomato	cytosol	20.75	28.24
Solyc08g013680.2.1	Tomato	cytosol	10.54	27.93
Solyc02g085050.2.1	Tomato	cytosol	19.39	21.27

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:50.3.6	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649
UniProt:K4D054	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF39	InterPro:Pyrophosphatase
InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	EnsemblPlantsGene:Solyc10g047950.1	EnsemblPlants:Solyc10g047950.1.1	UniParc:UPI0002769EE3	:

Description

No Description!

Coordinates

chr10:-:43146289..43152751

Molecular Weight (calculated)

32601.8 Da

IEP (calculated)

5.770

GRAVY (calculated)

-0.346

Length

294 amino acids

Sequence
(BLAST)

001: MAAASATVRV SANNTITASL ISKSPLQKPS IFHLCFRNGA AAAQRNRLFS CSAIYNPQIQ IKQHGQPETL DYRVFFAEDS GKKVSPWHDI PLNLGDGVFN
101: FIAEIPKESS AKMEVATDEQ YTPIKQDTKK GKLRYYPYNI NWNYGLLPQT WEDPSLANAE VEGAFGDNDP VDVVEIGESR AKMGQVLKVK PLAALAMIDE
201: GELDWKIVAI SLDDPRASLV NDIDDVEKHF PGTLTAIMDW FRDYKIPDGK PANKFGLGNK PANKDYALKV IMETNESWAK LVKRSIPAGD LSLI

Best Arabidopsis Sequence Match ( AT5G09650.1 )
(BLAST)

001: MAATRVLTAA TAVTQTTSCF LAKQAFTLPA KKSCGGFGGL CFSRRALVLK SKRPFSCSAI YNPQVKVQEE GPAESLDYRV FFLDGSGKKV SPWHDIPLTL
101: GDGVFNFIVE IPKESKAKME VATDEDFTPI KQDTKKGKLR YYPYNINWNY GLLPQTWEDP SHANSEVEGC FGDNDPVDVV EIGETQRKIG DILKIKPLAA
201: LAMIDEGELD WKIVAISLDD PKAHLVNDVE DVEKHFPGTL TAIRDWFRDY KIPDGKPANR FGLGDKPANK DYALKIIQET NESWAKLVKR SVDAGDLSLY

Arabidopsis Description

PPA6Soluble inorganic pyrophosphatase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.