Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| mitochondrion:
14690504
|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006029.1-P | Field mustard | plastid | 90.67 | 91.89 |
| CDY56549 | Canola | plastid | 90.33 | 91.55 |
| CDY21593 | Canola | plastid | 90.33 | 91.55 |
| CDX81134 | Canola | plastid | 90.0 | 91.53 |
| CDY71464 | Canola | plastid | 80.33 | 90.94 |
| CDX69894 | Canola | plastid | 90.0 | 90.6 |
| Bra009396.1-P | Field mustard | plastid | 89.67 | 90.27 |
| GSMUA_Achr6P30130_001 | Banana | cytosol | 53.67 | 88.46 |
| GSMUA_Achr9P26260_001 | Banana | cytosol | 53.33 | 87.91 |
| CDX85804 | Canola | plastid | 82.0 | 87.23 |
| KRH10663 | Soybean | nucleus | 73.67 | 76.74 |
| KRH21683 | Soybean | nucleus | 73.67 | 76.74 |
| Bra028625.1-P | Field mustard | plastid | 42.33 | 76.51 |
| PGSC0003DMT400008028 | Potato | extracellular | 73.67 | 76.21 |
| Solyc01g106430.2.1 | Tomato | plastid | 73.33 | 75.86 |
| PGSC0003DMT400068875 | Potato | cytosol | 72.67 | 74.66 |
| Solyc10g047950.1.1 | Tomato | plastid | 72.33 | 73.81 |
| Zm00001d018197_P001 | Maize | plastid | 67.33 | 70.14 |
| EES05862 | Sorghum | plastid | 67.0 | 69.79 |
| HORVU6Hr1G080160.1 | Barley | plastid | 66.0 | 68.99 |
| TraesCS6D01G308400.1 | Wheat | plastid | 65.67 | 68.64 |
| TraesCS6A01G329500.1 | Wheat | golgi | 65.33 | 68.29 |
| TraesCS6B01G360300.1 | Wheat | plastid | 65.33 | 68.29 |
| Os02t0768600-01 | Rice | plastid | 64.33 | 65.65 |
| VIT_03s0088g01290.t01 | Wine grape | plastid | 31.33 | 62.67 |
| VIT_18s0001g08170.t01 | Wine grape | cytosol | 56.0 | 55.26 |
| AT1G01050.1 | Thale cress | cytosol | 21.0 | 29.72 |
| AT2G46860.1 | Thale cress | cytosol | 21.0 | 29.17 |
| AT3G53620.1 | Thale cress | cytosol | 20.67 | 28.7 |
| AT4G01480.1 | Thale cress | cytosol | 20.33 | 28.24 |
| AT2G18230.1 | Thale cress | cytosol | 20.33 | 27.98 |
Protein Annotations
| KEGG:00190+3.6.1.1 | Gene3D:3.90.80.10 | MapMan:50.3.6 | EntrezGene:830824 | UniProt:A0A178UER1 | ProteinID:AED91421.1 |
| EMBL:AJ252210 | ArrayExpress:AT5G09650 | EnsemblPlantsGene:AT5G09650 | RefSeq:AT5G09650 | TAIR:AT5G09650 | RefSeq:AT5G09650-TAIR-G |
| EnsemblPlants:AT5G09650.1 | TAIR:AT5G09650.1 | EMBL:AY045945 | EMBL:AY079355 | EMBL:AY087275 | EMBL:AY551439 |
| Unigene:At.1794 | Symbol:AtPPa6 | ProteinID:BAB09520.1 | ProteinID:CAB89365.1 | GO:GO:0000287 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004427 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006796 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009628 |
| GO:GO:0009651 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0042742 | GO:GO:0046686 |
| GO:GO:0046872 | InterPro:IPR036649 | RefSeq:NP_196527.1 | ProteinID:OAO91754.1 | PFAM:PF00719 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00387 | PANTHER:PTHR10286 |
| PANTHER:PTHR10286:SF39 | InterPro:Pyrophosphatase | InterPro:Pyrophosphatase_sf | UniProt:Q9LXC9 | SUPFAM:SSF50324 | UniParc:UPI00000AA019 |
| SEG:seg | : | : | : | : | : |
Description
PPA6Soluble inorganic pyrophosphatase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC9]
Coordinates
chr5:-:2991149..2993213
Molecular Weight (calculated)
33381.7 Da
IEP (calculated)
5.797
GRAVY (calculated)
-0.363
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATRVLTAA TAVTQTTSCF LAKQAFTLPA KKSCGGFGGL CFSRRALVLK SKRPFSCSAI YNPQVKVQEE GPAESLDYRV FFLDGSGKKV SPWHDIPLTL
101: GDGVFNFIVE IPKESKAKME VATDEDFTPI KQDTKKGKLR YYPYNINWNY GLLPQTWEDP SHANSEVEGC FGDNDPVDVV EIGETQRKIG DILKIKPLAA
201: LAMIDEGELD WKIVAISLDD PKAHLVNDVE DVEKHFPGTL TAIRDWFRDY KIPDGKPANR FGLGDKPANK DYALKIIQET NESWAKLVKR SVDAGDLSLY
101: GDGVFNFIVE IPKESKAKME VATDEDFTPI KQDTKKGKLR YYPYNINWNY GLLPQTWEDP SHANSEVEGC FGDNDPVDVV EIGETQRKIG DILKIKPLAA
201: LAMIDEGELD WKIVAISLDD PKAHLVNDVE DVEKHFPGTL TAIRDWFRDY KIPDGKPANR FGLGDKPANK DYALKIIQET NESWAKLVKR SVDAGDLSLY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.