CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033292.1-P	Field mustard	cytosol	100.0	100.0
CDY15206	Canola	cytosol	97.17	98.56
CDY55328	Canola	cytosol	95.75	98.54
AT1G01050.1	Thale cress	cytosol	98.11	98.11
CDY32448	Canola	cytosol	95.28	98.06
CDY07141	Canola	cytosol	93.4	92.52
CDX97250	Canola	cytosol	92.92	92.06
CDY01933	Canola	cytosol	92.92	92.06
KRH47754	Soybean	cytosol	89.62	89.62
CDY48009	Canola	cytosol	89.62	87.96
CDY27516	Canola	cytosol	89.62	87.96
KRH68981	Soybean	cytosol	87.26	87.68
KRG97263	Soybean	cytosol	87.26	87.68
Solyc08g083370.2.1	Tomato	cytosol	83.49	86.34
PGSC0003DMT400015012	Potato	cytosol	77.36	85.86
PGSC0003DMT400012843	Potato	extracellular	84.91	85.31
Solyc12g055830.1.1	Tomato	extracellular	85.38	84.98
Solyc08g013680.2.1	Tomato	cytosol	43.87	83.78
VIT_02s0025g02980.t01	Wine grape	cytosol	82.55	81.78
CDY69447	Canola	cytosol	30.19	81.01
PGSC0003DMT400031865	Potato	cytosol	80.66	80.66
CDX78192	Canola	cytosol	81.6	79.72
CDX73537	Canola	cytosol	81.6	79.72
KRH06335	Soybean	cytosol	82.55	78.48
KRG98973	Soybean	cytosol	71.7	77.55
CDY46306	Canola	cytosol	72.64	70.32
CDY30321	Canola	cytosol	72.17	69.86
CDY64108	Canola	cytosol	72.17	69.86
KRG88877	Soybean	cytosol	36.32	66.96
KRH72403	Soybean	cytosol	42.45	66.67
CDY25149	Canola	cytosol	72.64	66.09
KRG99305	Soybean	cytosol	62.26	65.67
CDY44812	Canola	cytosol	19.34	25.95
CDY71464	Canola	plastid	29.25	23.4
CDY21593	Canola	plastid	30.19	21.62
CDX69894	Canola	plastid	30.19	21.48
CDX81134	Canola	plastid	29.25	21.02
CDY56549	Canola	plastid	29.25	20.95
CDX85804	Canola	plastid	25.47	19.15
CDX81136	Canola	cytosol	6.6	18.42

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:A0A078DS01	EnsemblPlants:CDX90003	ProteinID:CDX90003
ProteinID:CDX90003.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00150501001	InterPro:IPR036649	HAMAP:MF_00209
PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF37	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf
SUPFAM:SSF50324	UniParc:UPI0002544F7D	:	:	:	:

Description

BnaA10g00790D

Coordinates

chrLK031861:-:1209274..1210888

Molecular Weight (calculated)

24498.5 Da

IEP (calculated)

6.255

GRAVY (calculated)

-0.460

Length

212 amino acids

Sequence
(BLAST)

001: MSEETKENQK LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSEK AVDAIQYSMD
201: LYAEYILHTL RR

Best Arabidopsis Sequence Match ( AT1G01050.2 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.