CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32448	Canola	cytosol	99.51	99.51
Bra032616.1-P	Field mustard	cytosol	98.06	99.51
CDY15206	Canola	cytosol	98.06	96.65
CDX90003	Canola	cytosol	98.54	95.75
AT1G01050.1	Thale cress	cytosol	98.06	95.28
CDY07141	Canola	cytosol	93.69	90.19
CDX97250	Canola	cytosol	93.2	89.72
CDY01933	Canola	cytosol	93.2	89.72
KRH47754	Soybean	cytosol	91.26	88.68
KRG97263	Soybean	cytosol	89.81	87.68
KRH68981	Soybean	cytosol	89.32	87.2
CDY48009	Canola	cytosol	90.78	86.57
CDY27516	Canola	cytosol	90.78	86.57
Solyc08g083370.2.1	Tomato	cytosol	85.92	86.34
PGSC0003DMT400015012	Potato	cytosol	79.61	85.86
PGSC0003DMT400012843	Potato	extracellular	86.89	84.83
Solyc12g055830.1.1	Tomato	extracellular	87.38	84.51
Solyc08g013680.2.1	Tomato	cytosol	45.15	83.78
VIT_02s0025g02980.t01	Wine grape	cytosol	84.95	81.78
CDY69447	Canola	cytosol	31.07	81.01
PGSC0003DMT400031865	Potato	cytosol	83.01	80.66
CDX78192	Canola	cytosol	83.01	78.8
CDX73537	Canola	cytosol	83.01	78.8
KRG98973	Soybean	cytosol	74.27	78.06
KRH06335	Soybean	cytosol	84.47	78.03
CDY46306	Canola	cytosol	75.24	70.78
CDY64108	Canola	cytosol	74.76	70.32
CDY30321	Canola	cytosol	74.76	70.32
KRG88877	Soybean	cytosol	37.38	66.96
KRH72403	Soybean	cytosol	43.69	66.67
CDY25149	Canola	cytosol	75.24	66.52
KRG99305	Soybean	cytosol	64.08	65.67
CDY44812	Canola	cytosol	18.93	24.68
CDY71464	Canola	plastid	29.61	23.02
CDY21593	Canola	plastid	30.1	20.95
CDX69894	Canola	plastid	30.1	20.81
CDX81134	Canola	plastid	29.61	20.68
CDY56549	Canola	plastid	29.61	20.61
CDX85804	Canola	plastid	26.21	19.15
CDX81136	Canola	cytosol	6.8	18.42

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:A0A078J0H0	UniProt:A0A078J0H0	EnsemblPlants:CDY55328
ProteinID:CDY55328	ProteinID:CDY55328.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00016678001	InterPro:IPR036649
HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF37	InterPro:Pyrophosphatase
InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	UniParc:UPI0004EF1081	:	:	:

Description

BnaC08g49780DBnaC08g49780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0H0]

Coordinates

chrLK033393:-:48475..50246

Molecular Weight (calculated)

23784.6 Da

IEP (calculated)

5.652

GRAVY (calculated)

-0.413

Length

206 amino acids

Sequence
(BLAST)

001: MSEEQQRPAP RLNERILSSL SRRSVAAHPW HDLEIGPGAP QIFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFVPRTLC EDNDPIDVLV
101: IMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCVDDP EYKHYTDIKE LPPHRLSEIR RFFEDYKKNE NKEVAVNDFL PSENAIDAIQ YSMDLYAEYI
201: LHTLRR

Best Arabidopsis Sequence Match ( AT1G01050.2 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.