Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46306 | Canola | cytosol | 92.7 | 98.63 |
| CDY64108 | Canola | cytosol | 91.42 | 97.26 |
| CDY30321 | Canola | cytosol | 91.42 | 97.26 |
| AT2G18230.1 | Thale cress | cytosol | 89.27 | 95.41 |
| KRH28709 | Soybean | nucleus | 73.39 | 80.28 |
| KRH76757 | Soybean | cytosol | 72.53 | 79.34 |
| Zm00001d051564_P001 | Maize | cytosol | 63.95 | 77.6 |
| PGSC0003DMT400009045 | Potato | cytosol | 70.39 | 76.64 |
| VIT_04s0023g02050.t01 | Wine grape | cytosol | 70.39 | 76.28 |
| CDY55328 | Canola | cytosol | 66.52 | 75.24 |
| KXG30923 | Sorghum | cytosol | 66.52 | 75.24 |
| CDY32448 | Canola | cytosol | 66.09 | 74.76 |
| CDX78192 | Canola | cytosol | 69.53 | 74.65 |
| CDX73537 | Canola | cytosol | 69.53 | 74.65 |
| Os02t0704900-02 | Rice | plasma membrane, plastid | 67.81 | 73.83 |
| CDY15206 | Canola | cytosol | 66.09 | 73.68 |
| TraesCS6D01G252400.1 | Wheat | cytosol | 67.38 | 73.36 |
| TraesCS6A01G272300.1 | Wheat | cytosol | 67.38 | 73.36 |
| HORVU6Hr1G068760.1 | Barley | cytosol | 67.38 | 73.36 |
| TraesCS6B01G299800.1 | Wheat | cytosol | 66.95 | 72.9 |
| CDX90003 | Canola | cytosol | 66.09 | 72.64 |
| CDX97250 | Canola | cytosol | 66.09 | 71.96 |
| CDY01933 | Canola | cytosol | 66.09 | 71.96 |
| CDY07141 | Canola | cytosol | 65.24 | 71.03 |
| CDY48009 | Canola | cytosol | 65.24 | 70.37 |
| CDY27516 | Canola | cytosol | 65.24 | 70.37 |
| Solyc02g085050.2.1 | Tomato | cytosol | 71.24 | 61.94 |
| CDY69447 | Canola | cytosol | 19.31 | 56.96 |
| GSMUA_Achr5P23650_001 | Banana | extracellular | 68.24 | 52.82 |
| Zm00001d017770_P001 | Maize | mitochondrion | 65.67 | 48.27 |
| CDY44812 | Canola | cytosol | 15.88 | 23.42 |
| CDY71464 | Canola | plastid | 26.18 | 23.02 |
| CDX81134 | Canola | plastid | 26.61 | 21.02 |
| CDY56549 | Canola | plastid | 26.61 | 20.95 |
| CDY21593 | Canola | plastid | 26.18 | 20.61 |
| CDX69894 | Canola | plastid | 26.18 | 20.47 |
| CDX85804 | Canola | plastid | 23.18 | 19.15 |
| CDX81136 | Canola | cytosol | 4.29 | 13.16 |
Protein Annotations
| KEGG:00190+3.6.1.1 | Gene3D:3.90.80.10 | MapMan:35.1 | GO:A0A078GIQ6 | UniProt:A0A078GIQ6 | EnsemblPlants:CDY25149 |
| ProteinID:CDY25149 | ProteinID:CDY25149.1 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004427 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006796 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00029061001 | InterPro:IPR036649 |
| HAMAP:MF_00209 | PFAM:PF00719 | ScanProsite:PS00387 | PANTHER:PTHR10286 | PANTHER:PTHR10286:SF40 | InterPro:Pyrophosphatase |
| InterPro:Pyrophosphatase_sf | SUPFAM:SSF50324 | UniParc:UPI0004EEC024 | : | : | : |
Description
BnaC07g03580DBnaC07g03580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GIQ6]
Coordinates
chrLK032169:-:417950..420212
Molecular Weight (calculated)
26252.4 Da
IEP (calculated)
6.096
GRAVY (calculated)
-0.309
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLHISDAFS EHFDMADNKD GVTPKGSAAF PLRNPNVTLN ERNFAAFTHR SAAAHPWHDL EIGPEAPAVF NCVVEISKGG KVKYELDKNS GLIKVDRVLY
101: SSIVYPHNYG FIPRTICEDS DPIDVLVLMQ EPVLTGSFLR ARAIGLMPMI DQGEKDDKII AVCADDPEFR HYRDIKELPP HRLAEIRRFF EDYKKNENKK
201: VAVEGFLPAQ AAIDAIKDSM DLYAAYIKAG LQR
101: SSIVYPHNYG FIPRTICEDS DPIDVLVLMQ EPVLTGSFLR ARAIGLMPMI DQGEKDDKII AVCADDPEFR HYRDIKELPP HRLAEIRRFF EDYKKNENKK
201: VAVEGFLPAQ AAIDAIKDSM DLYAAYIKAG LQR
001: MAEIKDEGSA KGYAFPLRNP NVTLNERNFA AFTHRSAAAH PWHDLEIGPE APTVFNCVVE ISKGGKVKYE LDKNSGLIKV DRVLYSSIVY PHNYGFIPRT
101: ICEDSDPMDV LVLMQEPVLT GSFLRARAIG LMPMIDQGEK DDKIIAVCAD DPEFRHYRDI KELPPHRLAE IRRFFEDYKK NENKKVDVEA FLPAQAAIDA
201: IKDSMDLYAA YIKAGLQR
101: ICEDSDPMDV LVLMQEPVLT GSFLRARAIG LMPMIDQGEK DDKIIAVCAD DPEFRHYRDI KELPPHRLAE IRRFFEDYKK NENKKVDVEA FLPAQAAIDA
201: IKDSMDLYAA YIKAGLQR
Arabidopsis Description
PPA2PPa2 [Source:UniProtKB/TrEMBL;Acc:A0A178VY12]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.