Factsheet for PGSC0003DMT400009045

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0023g02050.t01	Wine grape	cytosol	86.92	86.51
KRH28709	Soybean	nucleus	85.51	85.92
KRH76757	Soybean	cytosol	84.58	84.98
KXG30923	Sorghum	cytosol	79.91	83.01
Zm00001d051564_P001	Maize	cytosol	73.36	81.77
PGSC0003DMT400015012	Potato	cytosol	72.9	81.68
PGSC0003DMT400012843	Potato	extracellular	79.91	81.04
TraesCS6D01G252400.1	Wheat	cytosol	79.91	79.91
TraesCS6A01G272300.1	Wheat	cytosol	79.91	79.91
HORVU6Hr1G068760.1	Barley	cytosol	79.91	79.91
TraesCS6B01G299800.1	Wheat	cytosol	79.44	79.44
Os02t0704900-02	Rice	plasma membrane, plastid	79.44	79.44
Solyc02g085050.2.1	Tomato	cytosol	98.13	78.36
PGSC0003DMT400023069	Potato	cytosol	77.1	76.39
AT2G18230.1	Thale cress	cytosol	76.64	75.23
CDY46306	Canola	cytosol	76.64	74.89
Bra037229.1-P	Field mustard	cytosol	75.7	73.97
CDY64108	Canola	cytosol	75.7	73.97
CDY30321	Canola	cytosol	75.7	73.97
PGSC0003DMT400031865	Potato	cytosol	72.9	73.58
CDY25149	Canola	cytosol	76.64	70.39
GSMUA_Achr5P23650_001	Banana	extracellular	82.24	58.47
Zm00001d017770_P001	Maize	mitochondrion	78.5	53.0
Bra039627.1-P	Field mustard	plastid	76.64	24.05
PGSC0003DMT400008028	Potato	extracellular	26.64	19.66
PGSC0003DMT400068875	Potato	cytosol	26.64	19.52

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:102585875	Gene3D:3.90.80.10	MapMan:35.1	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
InterPro:IPR036649	UniProt:M0ZVI2	HAMAP:MF_00209	PFAM:PF00719	EnsemblPlantsGene:PGSC0003DMG400003514	PGSC:PGSC0003DMG400003514
EnsemblPlants:PGSC0003DMT400009045	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF10	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf
SUPFAM:SSF50324	UniParc:UPI0002954037	RefSeq:XP_006340642.1	:	:	:

Description

Inorganic pyrophosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400003514]

Coordinates

chr2:-:40316881..40320313

Molecular Weight (calculated)

24036.9 Da

IEP (calculated)

6.041

GRAVY (calculated)

-0.268

Length

214 amino acids

Sequence
(BLAST)

001: MAENSGKGIG RNSGTSRVAL NERILSSMSR RSIAAHPWHD LEIGPGAPSI FNCVVEIGKG SKVKYELDKA SGLIKVDRIL YSSVVYPHNY GFIPRTLCED
101: SDPMDVLVLM QEPVLPSTFL RARAIGLMPM IDQGEKDDKI IAVCADDPEF RHYTDIKELP PHRLAEIRRF FEDYKKNENK SVAVEDFLPA EAAVEAIKYS
201: MDLYASYIVE SLRK

Best Arabidopsis Sequence Match ( AT1G01050.2 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.