Factsheet for PGSC0003DMT400023069

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g010380.2.1	Tomato	cytosol	97.69	97.69
VIT_08s0040g02470.t01	Wine grape	cytosol	87.5	87.5
GSMUA_Achr10P...	Banana	cytosol	84.72	85.12
AT3G53620.1	Thale cress	cytosol	83.33	83.33
PGSC0003DMT400015012	Potato	cytosol	73.61	83.25
Bra007016.1-P	Field mustard	cytosol	83.33	82.95
CDX78192	Canola	cytosol	83.33	82.95
Bra039808.1-P	Field mustard	cytosol	82.87	82.49
CDX73537	Canola	cytosol	82.87	82.49
EES18902	Sorghum	cytosol	81.48	82.24
Os05t0114000-01	Rice	cytosol	81.94	81.94
Zm00001d035616_P001	Maize	cytosol	82.87	81.36
TraesCS1D01G040000.1	Wheat	cytosol	81.02	80.65
TraesCS1B01G049200.1	Wheat	cytosol	80.56	80.18
KRG95822	Soybean	cytosol	84.72	79.91
TraesCS1A01G038300.1	Wheat	cytosol	80.09	79.72
KRH67552	Soybean	cytosol	85.19	79.65
PGSC0003DMT400012843	Potato	extracellular	77.31	79.15
TraesCS3D01G539900.1	Wheat	cytosol	81.94	79.02
Os01t0974800-01	Rice	cytosol	79.17	78.8
TraesCS3B01G611800.1	Wheat	cytosol	82.41	78.07
PGSC0003DMT400009045	Potato	cytosol	76.39	77.1
HORVU3Hr1G116580.1	Barley	cytosol	81.94	76.96
TraesCS3B01G611600.1	Wheat	golgi	81.94	75.97
TraesCS3A01G534700.1	Wheat	plastid	82.87	75.53
PGSC0003DMT400031865	Potato	cytosol	74.07	75.47
TraesCS3A01G534500.1	Wheat	cytosol, plastid	82.41	75.11
HORVU1Hr1G005920.4	Barley	cytosol, plastid	81.02	73.22
TraesCS3D01G540100.1	Wheat	cytosol, plastid	82.41	67.68
HORVU3Hr1G116650.3	Barley	cytosol, endoplasmic reticulum	81.48	55.17
Os11t0612950-00	Rice	cytosol	15.28	41.25
PGSC0003DMT400068875	Potato	cytosol	28.24	20.89
PGSC0003DMT400008028	Potato	extracellular	27.31	20.34

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:102587659	Gene3D:3.90.80.10	MapMan:35.1	EMBL:AJ225172	ProteinID:CAA12415
ProteinID:CAA12415.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006796
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046686	InterPro:IPR036649
UniProt:M1AHQ4	HAMAP:MF_00209	PFAM:PF00719	EnsemblPlantsGene:PGSC0003DMG400008932	PGSC:PGSC0003DMG400008932	EnsemblPlants:PGSC0003DMT400023069
ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF40	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324
UniParc:UPI000294972D	RefSeq:XP_006341063.1	RefSeq:XP_015161469.1	:	:	:

Description

Magnesium dependent soluble inorganic pyrophosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400008932]

Coordinates

chr9:-:2142107..2145943

Molecular Weight (calculated)

24681.7 Da

IEP (calculated)

5.371

GRAVY (calculated)

-0.349

Length

216 amino acids

Sequence
(BLAST)

001: MVPPIETQVK SPVSQKFSIP PLNERILSSM TRRSVAAHPW HDLEIGPDAP QIFNVVIEIS KGGKVKYELD KKTGLIKVDR VLYSSVVYPH NYGFIPRTLC
101: EDSDPLDVLV IMQEPILPGC FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYKHYTDINE LPPHRLAEIR RFFEDYKKNE NKEVAVNDFL PSDKAFEAVQ
201: HSQDLYADYI VESLRR

Best Arabidopsis Sequence Match ( AT3G53620.1 )
(BLAST)

001: MAPPIEVSTK SYVEKHVSLP TLNERILSSM SHRSVAAHPW HDLEIGPEAP IIFNCVVEIG KGSKVKYELD KTTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDSDPIDVLV IMQEPVIPGC FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LPPHRMAEIR RFFEDYKKNE NKEVAVNDFL PATAAYDAVQ
201: HSMDLYADYV VENLRR

Arabidopsis Description

PPA4PPa4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.