CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020769.1-P	Field mustard	plastid	96.85	99.68
CDY05240	Canola	mitochondrion	96.21	96.21
AT3G06230.1	Thale cress	plastid	66.25	71.67
CDX82067	Canola	mitochondrion	67.51	69.93
CDY71921	Canola	mitochondrion	66.56	68.95
CDY11103	Canola	mitochondrion	65.93	68.08
CDX68224	Canola	mitochondrion	65.93	67.86
VIT_17s0000g01970.t01	Wine grape	cytosol	55.84	56.37
KRH48688	Soybean	mitochondrion	53.31	53.14
KRH39022	Soybean	cytosol, mitochondrion	53.31	52.98
PGSC0003DMT400083995	Potato	cytosol	53.94	51.35
Solyc03g097920.1.1	Tomato	cytosol	53.94	51.04
KRH39023	Soybean	mitochondrion	33.75	48.2
KRH48686	Soybean	mitochondrion	35.02	46.25
CDY32415	Canola	cytosol, plastid	34.7	46.03
CDX82210	Canola	plastid	44.16	45.75
CDY27532	Canola	cytosol, plastid	45.11	43.73
CDX87830	Canola	cytosol	29.34	43.26
CDY37306	Canola	cytosol, plastid	45.11	43.2
CDX82209	Canola	plastid	44.16	42.42
CDY43920	Canola	cytosol, plastid	44.16	41.54
CDY32414	Canola	extracellular, plasma membrane	46.06	40.33
CDY46547	Canola	cytosol, plastid	43.53	38.87
CDY52951	Canola	cytosol	42.9	38.2
CDX93844	Canola	cytosol	29.02	37.7
CDY01289	Canola	cytosol	19.56	35.23
CDY64969	Canola	cytosol	34.38	32.73
CDX68588	Canola	cytosol	36.28	31.59
CDX88578	Canola	cytosol	35.65	31.56
CDY11913	Canola	cytosol	35.33	31.28
CDY32868	Canola	cytosol	25.24	31.25
CDY43527	Canola	cytosol	35.65	31.04
CDX92751	Canola	cytosol	34.07	30.59
CDY42757	Canola	cytosol	34.07	30.42
CDY39283	Canola	plasma membrane, vacuole	32.81	29.46
CDX78589	Canola	mitochondrion	19.87	27.88
CDY70105	Canola	cytosol	25.87	26.8
CDX70576	Canola	cytosol	14.51	24.34
CDY50119	Canola	cytosol	34.38	21.04
CDY42585	Canola	cytosol	34.38	21.04
CDY40903	Canola	cytosol	30.6	17.9
CDY62124	Canola	cytosol	23.97	15.77
CDY69326	Canola	cytosol	23.97	15.73
CDY47150	Canola	cytosol	23.97	15.73
CDY11594	Canola	cytosol	27.44	15.56
CDY57851	Canola	cytosol	27.44	14.6
CDY09438	Canola	cytosol	27.13	14.29
CDY03750	Canola	cytosol	26.81	14.1
CDX91026	Canola	cytosol	25.87	12.6
CDX85586	Canola	cytosol	25.87	12.6
CDX98536	Canola	cytosol	26.81	12.57
CDX97641	Canola	cytosol	26.81	12.57
CDY45937	Canola	cytosol	27.13	12.57
CDX95954	Canola	cytosol	30.28	12.39
CDY09880	Canola	cytosol	26.18	12.31
CDX69563	Canola	cytosol	25.87	12.18
CDX67984	Canola	cytosol	25.87	12.04
CDY54149	Canola	cytosol	29.97	12.01
CDX88555	Canola	cytosol	26.18	11.98
CDX87368	Canola	cytosol	26.18	11.77
CDY50304	Canola	cytosol	29.97	11.73
CDX79332	Canola	cytosol	25.87	11.71
CDY25260	Canola	cytosol	23.97	11.52
CDX94250	Canola	cytosol	23.97	11.45
CDX86848	Canola	mitochondrion	23.97	11.28
CDY53517	Canola	mitochondrion	23.97	11.18
CDY25875	Canola	plastid	27.13	11.03
CDY03490	Canola	mitochondrion	23.97	10.69
CDX76327	Canola	mitochondrion	23.97	10.59
CDX73633	Canola	cytosol	6.62	9.55
CDY25732	Canola	plastid	12.62	7.3
CDY70962	Canola	cytosol	5.36	4.66
CDX76326	Canola	plastid	0.0	0.0
CDY03491	Canola	plastid	0.0	0.0
CDY40902	Canola	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.1	Gene3D:3.30.200.20	GO:A0A078GHS4	UniProt:A0A078GHS4	EnsemblPlants:CDY24712
ProteinID:CDY24712	ProteinID:CDY24712.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00027100001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	PFscan:PS50011
PANTHER:PTHR24361	PANTHER:PTHR24361:SF453	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
UniParc:UPI0004EEAA37	SEG:seg	:	:	:	:

Description

BnaA05g31110DBnaA05g31110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHS4]

Coordinates

chrLK032162:+:582874..583827

Molecular Weight (calculated)

35256.4 Da

IEP (calculated)

6.313

GRAVY (calculated)

-0.195

Length

317 amino acids

Sequence
(BLAST)

001: MALIRNNRFM NLKLSLPQAP STSLPCFIPI ATASTTVTSS TSNTISASDL ERVNVLGFGS GGTVYKVSHK TTSATYALKK VKEDMDSTSR HQLLRETEIL
101: RLVDSPYVVK CHDIYEKPSG EVSILMEYMD LGTLESLRGN VVKEDQLALI ARQVLKGLSY LHGLKIVHRD IKPANLLRNS REEVKIADFG VSKIMVKSLD
201: KSNTFTGTCA YMSPERFDSE AADVSEEDKS NVYAGDIWSF GLTMLEILVG HFPLLAHEDK PDWATLMCAV CLGESPKAPE ECSEELKSFV DCCLRKKPSE
301: RWTASQLLNH PFLLQQD

Best Arabidopsis Sequence Match ( AT3G06230.1 )
(BLAST)

001: MVMVRDNQFL NLKLSPIQAP TTIPPCRFPI IPATKVSATV SSCASNTFSV ANLDRISVLG SGNGGTVFKV KDKTTSEIYA LKKVKENWDS TSLREIEILR
101: MVNSPYVAKC HDIFQNPSGE VSILMDYMDL GSLESLRGVT EKQLALMSRQ VLEGKNYLHE HKIVHRDIKP ANLLRSSKEE VKIADFGVSK IVVRSLNKCN
201: SFVGTFAYMS PERLDSEADG VTEEDKSNVY AGDIWSFGLT MLEILVGYYP MLPDQAAIVC AVCFGEPPKA PEECSDDLKS FMDCCLRKKA SER

Arabidopsis Description

ATMKK8MAP kinase kinase 8 [Source:TAIR;Acc:AT3G06230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.