Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40902 | Canola | nucleus | 55.07 | 81.38 |
| CDY54149 | Canola | cytosol | 98.63 | 45.51 |
| CDY50304 | Canola | cytosol | 98.08 | 44.2 |
| CDX95954 | Canola | cytosol | 84.38 | 39.74 |
| CDY40903 | Canola | cytosol | 29.04 | 19.56 |
| CDX97641 | Canola | cytosol | 18.9 | 10.21 |
| CDX98536 | Canola | cytosol | 18.9 | 10.21 |
| CDY45937 | Canola | cytosol | 18.9 | 10.09 |
| CDY25732 | Canola | plastid | 13.7 | 9.12 |
| CDX87830 | Canola | cytosol | 5.21 | 8.84 |
| CDY25875 | Canola | plastid | 18.63 | 8.72 |
| CDY25260 | Canola | cytosol | 15.07 | 8.33 |
| CDX94250 | Canola | cytosol | 15.07 | 8.28 |
| CDY03490 | Canola | mitochondrion | 15.34 | 7.88 |
| CDX76327 | Canola | mitochondrion | 15.34 | 7.8 |
| CDX86848 | Canola | mitochondrion | 13.97 | 7.57 |
| CDY53517 | Canola | mitochondrion | 13.97 | 7.5 |
| CDY70105 | Canola | cytosol | 6.03 | 7.19 |
| CDY09438 | Canola | cytosol | 11.23 | 6.81 |
| CDY32868 | Canola | cytosol | 4.66 | 6.64 |
| CDY03750 | Canola | cytosol | 10.96 | 6.63 |
| CDY11594 | Canola | cytosol | 9.86 | 6.44 |
| CDX69563 | Canola | cytosol | 11.78 | 6.39 |
| CDX85586 | Canola | cytosol | 11.23 | 6.3 |
| CDX91026 | Canola | cytosol | 11.23 | 6.3 |
| CDY09880 | Canola | cytosol | 11.51 | 6.23 |
| CDY62124 | Canola | cytosol | 8.22 | 6.22 |
| CDY57851 | Canola | cytosol | 10.14 | 6.21 |
| CDX79332 | Canola | cytosol | 11.78 | 6.14 |
| CDX67984 | Canola | cytosol | 11.23 | 6.02 |
| CDY47150 | Canola | cytosol | 7.95 | 6.0 |
| CDY69326 | Canola | cytosol | 7.95 | 6.0 |
| CDX87368 | Canola | cytosol | 11.51 | 5.96 |
| CDX88555 | Canola | cytosol | 11.23 | 5.92 |
| CDY71921 | Canola | mitochondrion | 4.93 | 5.88 |
| CDY43920 | Canola | cytosol, plastid | 5.21 | 5.64 |
| CDY46547 | Canola | cytosol, plastid | 5.48 | 5.63 |
| CDY52951 | Canola | cytosol | 5.48 | 5.62 |
| CDX82067 | Canola | mitochondrion | 4.66 | 5.56 |
| CDY11103 | Canola | mitochondrion | 4.66 | 5.54 |
| CDX68224 | Canola | mitochondrion | 4.66 | 5.52 |
| CDY50119 | Canola | cytosol | 7.67 | 5.41 |
| CDY42585 | Canola | cytosol | 7.67 | 5.41 |
| CDY24712 | Canola | mitochondrion | 4.66 | 5.36 |
| CDY05240 | Canola | mitochondrion | 4.38 | 5.05 |
| CDX82209 | Canola | plastid | 4.38 | 4.85 |
| CDX92751 | Canola | cytosol | 4.66 | 4.82 |
| CDY42757 | Canola | cytosol | 4.66 | 4.79 |
| CDY43527 | Canola | cytosol | 4.66 | 4.67 |
| CDX68588 | Canola | cytosol | 4.66 | 4.67 |
| CDY27532 | Canola | cytosol, plastid | 4.11 | 4.59 |
| CDX82210 | Canola | plastid | 3.84 | 4.58 |
| CDY37306 | Canola | cytosol, plastid | 4.11 | 4.53 |
| CDY11913 | Canola | cytosol | 4.38 | 4.47 |
| CDX88578 | Canola | cytosol | 4.38 | 4.47 |
| CDY32414 | Canola | extracellular, plasma membrane | 3.84 | 3.87 |
| CDY39283 | Canola | plasma membrane, vacuole | 3.56 | 3.68 |
| CDY64969 | Canola | cytosol | 3.29 | 3.6 |
| CDX70576 | Canola | cytosol | 0.27 | 0.53 |
| CDX73633 | Canola | cytosol | 0.27 | 0.45 |
| CDX78589 | Canola | mitochondrion | 0.27 | 0.44 |
| Zm00001d032255_P001 | Maize | cytosol | 0.0 | 0.0 |
| CDX93844 | Canola | cytosol | 0.0 | 0.0 |
| CDX76326 | Canola | plastid | 0.0 | 0.0 |
| CDY01289 | Canola | cytosol | 0.0 | 0.0 |
| CDY03491 | Canola | plastid | 0.0 | 0.0 |
| CDY32415 | Canola | cytosol, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY70962 | EnsemblPlantsGene:GSBRNA2T00008793001 | Gene3D:1.10.510.10 | InterPro:Kinase-like_dom_sf | PANTHER:PTHR24361 | PANTHER:PTHR24361:SF625 |
| ProteinID:CDY70962 | ProteinID:CDY70962.1 | SEG:seg | SUPFAM:SSF56112 | UniParc:UPI0004EE6F0B | UniProt:A0A078JZ63 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaCnng70550DBnaCnng70550D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JZ63]
Coordinates
chrLK043922:-:128..2400
Molecular Weight (calculated)
39923.5 Da
IEP (calculated)
6.118
GRAVY (calculated)
-0.425
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: VLFMISIEPA PMLEDKEKWS LVFHDFVAKC LTKEPRLRPT ADEMLKHKFI QRCKTGASAM SAKIEKSRQI RASMALQAQK VAASSEDTST LGLKSSEEMK
101: ITVPYTEAPP ACSLNPQHIS SNTALSGDFG TMIFHGEDEA DEIHSGSQLA KEKESSSSVG FSGEEVTRIH ERKNLPTTDV AVETSTSQSV RGTLSSIEHK
201: TRLSNISGTQ TEGGSDASGS TLKNETVGKK AFALQDKLWS IYAAGNTVPI PFLRATDISP IALLSENMIG GMQQDGNGSV AVEALQELFT SDPQSKKGRR
301: GQNEMPLPPS VYQRLTSSPP LMNLAQVLAY HRACYEEMPL QEMQATQEQQ TIQNLCDTLR TILRL
101: ITVPYTEAPP ACSLNPQHIS SNTALSGDFG TMIFHGEDEA DEIHSGSQLA KEKESSSSVG FSGEEVTRIH ERKNLPTTDV AVETSTSQSV RGTLSSIEHK
201: TRLSNISGTQ TEGGSDASGS TLKNETVGKK AFALQDKLWS IYAAGNTVPI PFLRATDISP IALLSENMIG GMQQDGNGSV AVEALQELFT SDPQSKKGRR
301: GQNEMPLPPS VYQRLTSSPP LMNLAQVLAY HRACYEEMPL QEMQATQEQQ TIQNLCDTLR TILRL
001: MDHNSPKSRR SRKPEPKPDI YSTFVVHSDS DSDQGRDRDK RKAKPEEDEN VDLYATMVYK GDSDGEGEED DDDDSMLPPL LKRLPKDFGG GASLDYDDDD
101: GDESGDFGTM IVKTDRSSHS KKNSPYSSKP RMGVSPRRRA RGGDEESSDE EDEEEDDDDD DGDYGTFVVK SKDKKGKKKD KEIDMTTMGR AVASMQKSNF
201: GGKTRKLDPS SSSSKLHGED NRKMQQQNSK MSTTSLPDSI TREDPTTKYE FLNELGKGSY GSVYKARDLK TSEIVAVKVI SLTEGEEGYE EIRGEIEMLQ
301: QCNHPNVVRY LGSYQGEDYL WIVMEYCGGG SVADLMNVTE EALEEYQIAY ICREALKGLA YLHSIYKVHR DIKGGNILLT EQGEVKLGDF GVAAQLTRTM
401: SKRNTFIGTP HWMAPEVIQE NRYDGKVDVW ALGVSAIEMA EGLPPRSSVH PMRVLFMISI EPAPMLEDKE KWSLVFHDFV AKCLTKEPRL RPTAAEMLKH
501: KFVERCKTGA SAMSPKIEKS RQIRATMALQ AQSVVAPSLE DTSTLGPKSS EELGITVPSK PPQNSTEAPL TSTLNRQHIT GNTVLAGEGG DFGTMIVHGE
601: DETEESDSRS QLVREKESSS SQFEGVPREF PGEELPDSWI HDKKKPPAID LPVEASISQS MQASSSHEHR TKLHNIAGTQ MEGGSDASGS TLKNETVGRK
701: AFALQDKLWS IYAAGNTVPI PFLRATDISP IALLSENMIG GMQQDGNGTV AVEALQELFT SSDPQSKKGR RGQNEMPLPP SVYQRLTTSS SLMNLAQVLA
801: YHRACYEEMP LQELQATQEQ QTIQNLCDTL RTILRL
101: GDESGDFGTM IVKTDRSSHS KKNSPYSSKP RMGVSPRRRA RGGDEESSDE EDEEEDDDDD DGDYGTFVVK SKDKKGKKKD KEIDMTTMGR AVASMQKSNF
201: GGKTRKLDPS SSSSKLHGED NRKMQQQNSK MSTTSLPDSI TREDPTTKYE FLNELGKGSY GSVYKARDLK TSEIVAVKVI SLTEGEEGYE EIRGEIEMLQ
301: QCNHPNVVRY LGSYQGEDYL WIVMEYCGGG SVADLMNVTE EALEEYQIAY ICREALKGLA YLHSIYKVHR DIKGGNILLT EQGEVKLGDF GVAAQLTRTM
401: SKRNTFIGTP HWMAPEVIQE NRYDGKVDVW ALGVSAIEMA EGLPPRSSVH PMRVLFMISI EPAPMLEDKE KWSLVFHDFV AKCLTKEPRL RPTAAEMLKH
501: KFVERCKTGA SAMSPKIEKS RQIRATMALQ AQSVVAPSLE DTSTLGPKSS EELGITVPSK PPQNSTEAPL TSTLNRQHIT GNTVLAGEGG DFGTMIVHGE
601: DETEESDSRS QLVREKESSS SQFEGVPREF PGEELPDSWI HDKKKPPAID LPVEASISQS MQASSSHEHR TKLHNIAGTQ MEGGSDASGS TLKNETVGRK
701: AFALQDKLWS IYAAGNTVPI PFLRATDISP IALLSENMIG GMQQDGNGTV AVEALQELFT SSDPQSKKGR RGQNEMPLPP SVYQRLTTSS SLMNLAQVLA
801: YHRACYEEMP LQELQATQEQ QTIQNLCDTL RTILRL
Arabidopsis Description
SIK1Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O24527]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.