CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03490	Canola	mitochondrion	96.1	97.05
CDY25260	Canola	cytosol	68.8	74.85
CDX94250	Canola	cytosol	68.38	73.95
CDX86848	Canola	mitochondrion	63.09	67.21
CDY53517	Canola	mitochondrion	62.53	66.03
CDY70105	Canola	cytosol	28.13	66.01
CDX78589	Canola	mitochondrion	20.06	63.72
CDX70576	Canola	cytosol	16.43	62.43
CDY11594	Canola	cytosol	34.54	44.36
CDX85586	Canola	cytosol	38.44	42.4
CDX91026	Canola	cytosol	38.44	42.4
CDY57851	Canola	cytosol	34.96	42.11
CDY09438	Canola	cytosol	34.96	41.69
CDY03750	Canola	cytosol	34.54	41.13
CDX69563	Canola	cytosol	38.3	40.86
CDY09880	Canola	cytosol	37.88	40.36
CDX67984	Canola	cytosol	36.77	38.77
CDX88555	Canola	cytosol	36.77	38.1
CDX79332	Canola	cytosol	37.05	38.0
CDX87368	Canola	cytosol	36.91	37.59
CDY62124	Canola	cytosol	23.82	35.48
CDY69326	Canola	cytosol	23.82	35.4
CDY47150	Canola	cytosol	23.82	35.4
CDX87830	Canola	cytosol	8.77	29.3
CDY32868	Canola	cytosol	9.75	27.34
CDX82067	Canola	mitochondrion	11.56	27.12
CDY71921	Canola	mitochondrion	11.42	26.8
CDY11103	Canola	mitochondrion	11.28	26.38
CDX68224	Canola	mitochondrion	11.14	25.97
CDX92751	Canola	cytosol	12.53	25.5
CDX82210	Canola	plastid	10.86	25.49
CDX82209	Canola	plastid	11.7	25.45
CDY43920	Canola	cytosol, plastid	11.84	25.22
CDY42757	Canola	cytosol	12.4	25.07
CDY37306	Canola	cytosol, plastid	11.28	24.47
CDY27532	Canola	cytosol, plastid	11.14	24.46
CDX88578	Canola	cytosol	11.98	24.02
CDY24712	Canola	mitochondrion	10.59	23.97
CDY05240	Canola	mitochondrion	10.59	23.97
CDY43527	Canola	cytosol	12.12	23.9
CDY32415	Canola	cytosol, plastid	7.94	23.85
CDY11913	Canola	cytosol	11.84	23.74
CDY46547	Canola	cytosol, plastid	11.7	23.66
CDX68588	Canola	cytosol	11.98	23.63
CDY64969	Canola	cytosol	10.86	23.42
CDY52951	Canola	cytosol	11.56	23.31
CDX97641	Canola	cytosol	21.03	22.34
CDX98536	Canola	cytosol	21.03	22.34
CDY39283	Canola	plasma membrane, vacuole	10.86	22.1
CDY45937	Canola	cytosol	21.03	22.08
CDY32414	Canola	extracellular, plasma membrane	11.0	21.82
CDY40903	Canola	cytosol	15.88	21.03
CDY25875	Canola	plastid	21.17	19.49
CDX93844	Canola	cytosol	6.41	18.85
CDY42585	Canola	cytosol	13.37	18.53
CDY50119	Canola	cytosol	13.37	18.53
CDX95954	Canola	cytosol	19.36	17.94
CDY54149	Canola	cytosol	19.64	17.83
CDY50304	Canola	cytosol	19.78	17.53
CDX73633	Canola	cytosol	5.29	17.27
CDY01289	Canola	cytosol	4.04	16.48
CDY70962	Canola	cytosol	7.8	15.34
CDY25732	Canola	plastid	10.03	13.14
CDY40902	Canola	nucleus	3.62	10.53
CDY03491	Canola	plastid	0.84	1.91
CDX76326	Canola	plastid	0.84	1.91

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.3	Gene3D:3.30.200.20	GO:A0A078CHS5	EnsemblPlants:CDX76327	ProteinID:CDX76327
ProteinID:CDX76327.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00126702001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF615
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	UniParc:UPI0004EDB70C	SEG:seg

Description

BnaA08g10730D

Coordinates

chrLK031807:+:393751..398822

Molecular Weight (calculated)

79500.7 Da

IEP (calculated)

8.255

GRAVY (calculated)

-0.494

Length

718 amino acids

Sequence
(BLAST)

001: MGFLRLVLEA VFGGKRRKKM VRGSSSSGGA VVRGGSSVKQ RGFSMNPKDY KLMEEVGHGA SAVVYRAIYL PTNEVIAVKC LDLDRCNSNL DDVRRESQTM
101: SLIDHPNVIK SFCSFSVDHS LWVVMPFMAQ GSCLHLMKTA YSDGFEESAI CSILKETLKA LDYLHKQGHI HRDVKAGNIL LDDNGEIKLG DFGVSACLFD
201: NGDRQRARNT FVGTPCWMAP EVLQPGNGYN SKADIWSFGI TALELAHGHA PFSKYPPMKV LLMTIQNAPP GLDYDRDKKF SKSFKEMVAM CLVKDQTKRP
301: TAEKLLKHSC FKNTKPPELA VKSLFADLPP LWTRVKSLQA KDAAQLALKR MATADEEAIS MSEYQRGVSA WNFDVKDLKT QASLLSDDDG LEESQEDEEI
401: FHTRFHNKVN DSPVLYENMN GKEKVSTTEV EEPNCEEKFT FITNASSVTP NSEHEVPEAK ANKPVRRQSQ SGPLTSRAVV SASEKGQMFE RSESEHQAAP
501: SVKRAPSFSG PLNLSTRASS NSLSAPIKYS GGFRDSLDEK SKGNLVQKGR FSVTSGNLDL AKDVPLSIVP RRSPQSSPLR KSASVGNWIP EPKMPTVQPQ
601: TIKELSSQPM SPSLIIPQLQ HIFQQNSVQQ DLLMNLLSSV QSAETMDGSQ SGKLPPLPRS ETNGTVDSVP SERERMLLSS ISELRAKLND LTEELDSEKS
701: RYNQLQQKLK AFTGRELV

Best Arabidopsis Sequence Match ( AT4G24100.4 )
(BLAST)

001: MGFRLVLEAV LKRRKKMVGG GGGSSGRGGG SGSGSSKQQR GFSMNPKDYK LMEEIGHGAS AVVYRAIYLP TNEVVAIKCL DLDRCNSNLD DIRRESQTMS
101: LIDHPNVIKS FCSFSVDHSL WVVMPFMAQG SCLHLMKTAY SDGFEESAIC CVLKETLKAL DYLHRQGHIH RDVKAGNILL DDNGEIKLGD FGVSACLFDN
201: GDRQRARNTF VGTPCWMAPE VLQPGNGYNS KADIWSFGIT ALELAHGHAP FSKYPPMKVL LMTIQNAPPG LDYDRDKKFS KSFKEMVAMC LVKDQTKRPT
301: AEKLLKHSCF KHTKPPEQTV KILFSDLPPL WTRVKSLQDK DAQQLALKRM ATADEEAISQ SEYQRGVSAW NFDVRDLKTQ ASLLIDDDDL EESKEDEEIL
401: CAQFNKVNDR EQVFDSLQLY ENMNGKEKVS NTEVEEPTCK EKFTFVTTTS SLERMSPNSE HDIPEAKVKP LRRQSQSGPL TSRTVLSHSA SEKSHIFERS
501: ESEPQTAPTV RRAPSFSGPL NLSTRASSNS LSAPIKYSGG FRDSLDDKSK ANLVQKGRFS VTSGNVDLAK DVPLSIVPRR SPQATPLRKS ASVGNWILEP
601: KMPTAQPQTI KEHSSHPTSS SPIMPQLQHL FQQNSIQQDL IMNLLNSLQP VEATEGSQSG KLPPLPRSDS NGNVEPVASE RERLLLSSIS DLRARLDDLT
701: EELDIEKSKY SQLQQKLKAF TGREH

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT4G24100]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.