CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G53165.3	Thale cress	cytosol	89.62	89.1
CDY25875	Canola	plastid	98.54	86.41
CDX97641	Canola	cytosol	78.51	79.44
CDX98536	Canola	cytosol	78.22	79.14
VIT_19s0014g02310.t01	Wine grape	cytosol	67.4	65.3
KRH22048	Soybean	cytosol	65.06	64.03
KRH55216	Soybean	cytosol	65.35	63.77
KRG88825	Soybean	cytosol	64.91	62.98
KRH27275	Soybean	cytosol, nucleus, plasma membrane	62.28	62.74
Solyc07g062940.2.1	Tomato	cytosol	65.2	62.29
TraesCS2D01G232200.1	Wheat	cytosol	58.33	57.66
TraesCS2B01G249900.1	Wheat	cytosol	58.33	57.66
TraesCS2A01G233400.1	Wheat	cytosol	58.33	57.66
HORVU2Hr1G047960.2	Barley	cytosol	58.33	57.66
Os07t0507300-01	Rice	cytosol	56.43	55.62
CDY25732	Canola	plastid	44.44	55.47
EER99430	Sorghum	cytosol	55.85	55.44
Zm00001d021584_P003	Maize	cytosol	53.07	52.46
GSMUA_Achr4P23660_001	Banana	cytosol	55.85	51.41
CDY70105	Canola	cytosol	16.96	37.91
CDX78589	Canola	mitochondrion	12.13	36.73
CDX70576	Canola	cytosol	10.09	36.51
CDY32868	Canola	cytosol	11.4	30.47
CDX92751	Canola	cytosol	14.77	28.61
CDX87830	Canola	cytosol	8.92	28.37
CDY42757	Canola	cytosol	14.62	28.17
CDX82067	Canola	mitochondrion	12.43	27.78
CDY05240	Canola	mitochondrion	12.72	27.44
CDY11103	Canola	mitochondrion	12.28	27.36
CDY24712	Canola	mitochondrion	12.57	27.13
CDY71921	Canola	mitochondrion	12.13	27.12
CDX68224	Canola	mitochondrion	12.13	26.95
CDX82210	Canola	plastid	11.99	26.8
CDX68588	Canola	cytosol	14.04	26.37
CDY11913	Canola	cytosol	13.74	26.26
CDY43527	Canola	cytosol	13.89	26.1
CDY40903	Canola	cytosol	20.61	26.01
CDX88578	Canola	cytosol	13.6	25.98
CDY64969	Canola	cytosol	12.57	25.83
CDY11594	Canola	cytosol	20.91	25.58
CDY09438	Canola	cytosol	22.51	25.58
CDY03750	Canola	cytosol	22.51	25.54
CDY62124	Canola	cytosol	17.98	25.52
CDY69326	Canola	cytosol	17.98	25.47
CDY47150	Canola	cytosol	17.98	25.47
CDX82209	Canola	plastid	12.13	25.15
CDY27532	Canola	cytosol, plastid	11.99	25.08
CDY37306	Canola	cytosol, plastid	11.99	24.77
CDY57851	Canola	cytosol	21.2	24.33
CDY32415	Canola	cytosol, plastid	8.48	24.27
CDX91026	Canola	cytosol	22.51	23.66
CDX85586	Canola	cytosol	22.51	23.66
CDY39283	Canola	plasma membrane, vacuole	12.13	23.51
CDY46547	Canola	cytosol, plastid	12.13	23.38
CDX69563	Canola	cytosol	22.95	23.33
CDY52951	Canola	cytosol	12.13	23.31
CDY25260	Canola	cytosol	22.22	23.03
CDY09880	Canola	cytosol	22.66	23.0
CDY32414	Canola	extracellular, plasma membrane	12.13	22.93
CDY43920	Canola	cytosol, plastid	11.26	22.85
CDX94250	Canola	cytosol	22.08	22.74
CDY54149	Canola	cytosol	25.73	22.25
CDY50304	Canola	cytosol	26.17	22.1
CDX95954	Canola	cytosol	25.0	22.06
CDX86848	Canola	mitochondrion	21.34	21.66
CDY03490	Canola	mitochondrion	22.08	21.24
CDY53517	Canola	mitochondrion	21.05	21.18
CDX76327	Canola	mitochondrion	22.08	21.03
CDX88555	Canola	cytosol	21.2	20.92
CDX93844	Canola	cytosol	7.46	20.9
CDX67984	Canola	cytosol	20.61	20.7
CDX87368	Canola	cytosol	21.2	20.57
CDX79332	Canola	cytosol	20.76	20.29
CDY50119	Canola	cytosol	14.77	19.5
CDY42585	Canola	cytosol	14.62	19.3
CDY70962	Canola	cytosol	10.09	18.9
CDY01289	Canola	cytosol	4.82	18.75
CDY40902	Canola	nucleus	4.82	13.36
CDX73633	Canola	cytosol	3.95	12.27
CDX76326	Canola	plastid	0.0	0.0
CDY03491	Canola	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.3	Gene3D:3.30.200.20	GO:A0A078I754	UniProt:A0A078I754	EnsemblPlants:CDY45937
ProteinID:CDY45937	ProteinID:CDY45937.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00082932001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF633	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	UniParc:UPI0004EE821B
SEG:seg	:	:	:	:	:

Description

BnaC06g10060DBnaC06g10060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I754]

Coordinates

chrLK032642:-:191039..196573

Molecular Weight (calculated)

75218.1 Da

IEP (calculated)

7.066

GRAVY (calculated)

-0.620

Length

684 amino acids

Sequence
(BLAST)

001: MDGVAGLQEA AGARFSQVEL IGRGSFGDVY KAFDSELNKE VAIKVIDLEE SEDEIEDIQK EISVLSQCRC PYITEYYGSY LHQTKLWIIM EYMAGGSVAD
101: LLQPGHPLDE ISIACITRDL LHAVEYLHTE GKIHRDIKAA NILLSENGDV KVADFGVSAQ LTRTISRRKT FVGTPFWMAP EVIQNSEGYN EKADIWSLGI
201: TMIEMAKGEP PLADLHPMRV LFIIPRESPP QLDEHFSRPL KEFVSFCLKK APAERPSAKE LLKHRFIKSA RKSPKLLERI RERPKYKVKE DEDSPTRDPK
301: SPAESSGTVR VARDDRGHGT SGTSFQGRTI KNAGWDFSIG GSQSAGTVRA LKPPQSRERR QEVTSDQSFQ KSSRASASQL SSTSGAVVPE ISEGGFLKRD
401: SYQNDCQEED DSSLSGSGTV VIRSPRSSQS SSVFRDLSSG STSRYTSFDD ASTSGTVVVR GQNDDSGSPR TPKSRLGLQE RSSSASEDSI ANLAEAKVAL
501: ESGFRRGNAR ERLGNGKVNK RREQAKDGFD QLRSSRDDSD KQKPLIRSQQ VSDDEDESEL ASLSASLSLL LLPSLKEAVG GDTSKGSVGH RVSRALVKME
601: REKPGSSEAF IAKLIEQLGS SKEVSVAEVQ DMAIRVFGKT VNNDAENKRK QASKEFASNT NVSSLGRFLF SRWLGQTSRD LNPS

Best Arabidopsis Sequence Match ( AT1G53165.1 )
(BLAST)

001: MDDVAGLQEA AGTRFSQFEL IGRGSFGDVY KAFDTELNKD VAIKVIDLEE SEDEIEDIQK EISVLSQCRC PYITEYYGSY LHQTKLWIIM EYMAGGSVAD
101: LLQPGNPLDE ISIACITRDL LHAVEYLHAE GKIHRDIKAA NILLSENGDV KVADFGVSAQ LTRTISRRKT FVGTPFWMAP EVIQNSEGYN EKADIWSLGI
201: TMIEMAKGEP PLADLHPMRV LFIIPRESPP QLDEHFSRPL KEFVSFCLKK APAERPNAKE LLKHRFIKNA RKSPKLLERI RERPKYQVKE DEEIPTNGPK
301: APAESSGTVR VAKDERGQGT SGTSFQVKTV RNAGWDFSIG GSQGAGTVRA LKPPQARERR QEVNSNQTSQ KTSRTSGSQL SSTFGVPEIS EGGFNKRDSY
401: QNDYQEEDDS SGSGTVVIRS PRSSQSSSMF RDQSSGSTRY TSFDDASTSG TVVVRGQNDD SGSPRTPRSR LGLQERSSSA SEDSISNLAE AKLALEAGFR
501: RGNARERLGN GKVNKRREQA TDNSDYLRNS RDHSDKQRPV MRSQQVSDDE EDDSKLASLS ASLSLLLLPS LKEAVGGDDS KGTIGHRVSR SLVKMEREKP
601: GSSEAFIAKL IEQLGSTKEV SVKEVQDMAI RVFAKTMNND AENKRKQASK EFSSNANFSP LARFLFSRWL GQTSRDLNQS

Arabidopsis Description

ATMAP4K ALPHA1Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HPR9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.