Factsheet for Solyc05g012130.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g00300.t01	Wine grape	cytosol	65.24	64.14
KRH75082	Soybean	cytosol	61.44	63.14
CDX95954	Canola	cytosol	59.85	63.1
KRH70943	Soybean	cytosol	63.4	62.04
CDY54149	Canola	cytosol	59.73	61.69
AT1G69220.1	Thale cress	cytosol	62.42	61.0
CDY50304	Canola	cytosol	59.73	60.25
Bra004366.1-P	Field mustard	cytosol	59.49	56.51
GSMUA_Achr7P00480_001	Banana	cytosol	55.45	55.86
Os03t0755000-01	Rice	cytosol, mitochondrion, plastid	55.2	53.75
TraesCS5D01G402300.1	Wheat	cytosol	53.49	53.16
TraesCS5A01G392500.1	Wheat	cytosol	53.49	52.97
HORVU5Hr1G095970.2	Barley	cytosol	53.37	52.15
Zm00001d034055_P001	Maize	cytosol	54.35	52.05
OQU90965	Sorghum	cytosol	54.22	51.81
TraesCS5B01G397300.1	Wheat	cytosol	53.61	51.05
Solyc03g097920.1.1	Tomato	cytosol	12.48	30.45
Solyc03g119490.2.1	Tomato	cytosol, extracellular	12.36	28.53
Solyc03g123800.1.1	Tomato	nucleus	12.24	27.86
Solyc12g009020.1.1	Tomato	cytosol	12.0	27.45
Solyc07g062940.2.1	Tomato	cytosol	22.03	25.14
Solyc02g086790.2.1	Tomato	cytosol	17.26	21.53
Solyc06g053730.1.1	Tomato	cytosol	13.71	21.5
Solyc08g083040.2.1	Tomato	cytosol	17.99	20.22
Solyc08g008550.2.1	Tomato	cytosol	17.38	19.94
Solyc03g019850.2.1	Tomato	cytosol	12.24	19.42
Solyc06g068590.2.1	Tomato	cytosol	15.06	18.84
Solyc03g117790.1.1	Tomato	cytosol	15.91	18.62

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0000775	GO:GO:0001558
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694
GO:GO:0005737	GO:GO:0005739	GO:GO:0005768	GO:GO:0005769	GO:GO:0005794	GO:GO:0005802
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154
GO:GO:0007165	GO:GO:0007266	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0016301	GO:GO:0016477	GO:GO:0016740
GO:GO:0019538	GO:GO:0023014	GO:GO:0030036	GO:GO:0031098	GO:GO:0032147	GO:GO:0040007
GO:GO:0042127	GO:GO:0043408	GO:GO:0048365	InterPro:IPR000719	UniProt:K4BXT6	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF413	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	EnsemblPlantsGene:Solyc05g012130.2	EnsemblPlants:Solyc05g012130.2.1	UniParc:UPI00027673EB
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:5333154..5343576

Molecular Weight (calculated)

90233.1 Da

IEP (calculated)

4.709

GRAVY (calculated)

-0.600

Length

817 amino acids

Sequence
(BLAST)

001: MEFRPSSWRS RKPPPPAKQS DIYSTFVIHD NDRKTDEKDN SDLYATMVCK DDDDDDVVDD LNDDESLPPL LKRLPKDFGG GGGAIDSVSD DDMASISGTM
101: IVKTDRSSKF TTPKQPQQQT ARYMSYWDRD EKSPVRRRYE EDEDEDEEEE EEDGRFSTFV VKDNEFDSGT MVRRTVRSGS NEGAGSTMSR AVASMQAAGE
201: IGIGRQRNRS SRAPSDEEGG TLRPQGSKVS SSSIPDSVTR EDPCTKYELL HELGKGSYGA VYKARDLRTS EMVAIKVISL SEGEEGYEEI RGEIEMLQQC
301: SHPNVVRYLG SYQGEEYLWI VMEYCGGGSV ADLMNVTDEA LEEYQIAFIC REALKGLSYL HSIFKVHRDI KGGNILLTDQ GEVKLGDFGV AAQLTRTMSK
401: RNTFIGTPHW MAPEVIQESR YDGKVDVWAL GVSAIEMAEG LPPRATVHPM RVLFMISIEP APMLEDKEKW SLVFHDFVAK CLTKDPRLRP TASEMLKHKF
501: IEKFKAGASV MMPKIEKAKQ IRASMALEAQ NIASETPEVL GGPKVNDEFG DTVPSKPKND DAPSTSLEPV GEGDFGTMIV RDGPDIDKTA SQIRNAEASS
601: TLRRTGIPSI PTIAGKSNDP WLLNDIDVSS PVGMSQRQSM QVSSPGTLPS PDQGLKGSTT SQATVSSGGG GYNTGTLPNE TVSRRALDKL RSIYSAGNTV
701: PIPFLRATDI SPIALLSEDV LGDWQRDNSG KTAVEAMQEL FSGDSQSKKG RSRQNEVPLP PSVYQRLTSS PTLMNLAQAL AYHKMCYEEM PLQEMQASQE
801: QQTIQNLCDT LRTILRL

Best Arabidopsis Sequence Match ( AT1G69220.1 )
(BLAST)

001: MDHNSPKSRR SRKPEPKPDI YSTFVVHSDS DSDQGRDRDK RKAKPEEDEN VDLYATMVYK GDSDGEGEED DDDDSMLPPL LKRLPKDFGG GASLDYDDDD
101: GDESGDFGTM IVKTDRSSHS KKNSPYSSKP RMGVSPRRRA RGGDEESSDE EDEEEDDDDD DGDYGTFVVK SKDKKGKKKD KEIDMTTMGR AVASMQKSNF
201: GGKTRKLDPS SSSSKLHGED NRKMQQQNSK MSTTSLPDSI TREDPTTKYE FLNELGKGSY GSVYKARDLK TSEIVAVKVI SLTEGEEGYE EIRGEIEMLQ
301: QCNHPNVVRY LGSYQGEDYL WIVMEYCGGG SVADLMNVTE EALEEYQIAY ICREALKGLA YLHSIYKVHR DIKGGNILLT EQGEVKLGDF GVAAQLTRTM
401: SKRNTFIGTP HWMAPEVIQE NRYDGKVDVW ALGVSAIEMA EGLPPRSSVH PMRVLFMISI EPAPMLEDKE KWSLVFHDFV AKCLTKEPRL RPTAAEMLKH
501: KFVERCKTGA SAMSPKIEKS RQIRATMALQ AQSVVAPSLE DTSTLGPKSS EELGITVPSK PPQNSTEAPL TSTLNRQHIT GNTVLAGEGG DFGTMIVHGE
601: DETEESDSRS QLVREKESSS SQFEGVPREF PGEELPDSWI HDKKKPPAID LPVEASISQS MQASSSHEHR TKLHNIAGTQ MEGGSDASGS TLKNETVGRK
701: AFALQDKLWS IYAAGNTVPI PFLRATDISP IALLSENMIG GMQQDGNGTV AVEALQELFT SSDPQSKKGR RGQNEMPLPP SVYQRLTTSS SLMNLAQVLA
801: YHRACYEEMP LQELQATQEQ QTIQNLCDTL RTILRL

Arabidopsis Description

SIK1Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O24527]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.