Factsheet for TraesCS4D01G047900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G266300.1	Wheat	mitochondrion	89.68	95.72
TraesCS4D01G048500.1	Wheat	mitochondrion	91.4	93.0
TraesCS4B01G048100.1	Wheat	mitochondrion	91.4	93.0
HORVU4Hr1G007990.1	Barley	mitochondrion	86.53	89.61
EER93571	Sorghum	mitochondrion	77.36	80.36
Zm00001d033754_P001	Maize	cytosol, mitochondrion, plastid	75.93	79.58
Zm00001d013423_P001	Maize	cytosol	73.35	69.19
TraesCS4D01G049100.1	Wheat	cytosol, mitochondrion	61.89	63.91
TraesCS4D01G048800.1	Wheat	cytosol, mitochondrion	61.03	63.77
TraesCS4D01G239400.1	Wheat	mitochondrion	49.28	51.81
Os03t0713500-00	Rice	cytosol, nucleus, plastid	66.48	50.11
TraesCS1D01G399400.1	Wheat	cytosol, mitochondrion, plastid, vacuole	46.42	46.29
TraesCS7D01G155100.1	Wheat	plastid	38.97	38.97
TraesCS6D01G328800.1	Wheat	cytosol, plastid	38.4	36.41
TraesCS4D01G312300.3	Wheat	cytosol	31.52	30.99
TraesCS7D01G092900.1	Wheat	cytosol	28.08	28.08
TraesCS5D01G549600.1	Wheat	cytosol	26.93	17.97
TraesCS5D01G130900.2	Wheat	cytosol	26.36	17.52
TraesCS5D01G203600.1	Wheat	cytosol	22.64	15.25
TraesCS6D01G139200.1	Wheat	cytosol	20.34	13.95
TraesCS5D01G402300.1	Wheat	cytosol	27.51	11.68
TraesCS6D01G335800.1	Wheat	cytosol	23.21	11.65
TraesCS7D01G232400.1	Wheat	cytosol	23.5	11.57
TraesCS2D01G232200.1	Wheat	cytosol	22.64	11.42
TraesCS1D01G185000.2	Wheat	cytosol, mitochondrion, nucleus	21.78	10.4

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF397	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS4D01G047900	EnsemblPlants:TraesCS4D01G047900.1	TIGR:cd06623	SEG:seg	:	:

Description

No Description!

Coordinates

chr4D:-:23481633..23482682

Molecular Weight (calculated)

36774.2 Da

IEP (calculated)

8.566

GRAVY (calculated)

0.053

Length

349 amino acids

Sequence
(BLAST)

001: MALIREKRLP QLHLSLPVPP RAAPQELGVL GRRPNPAVPP APTATKASTP SALSSQFRLA DFEKLAVLGR GNGGTVYKVR HRETHALYAL KVQHYGDPAA
101: AAEADVLSRT ASPFVVRCHS VLPAAASGDV ALLLELVDGG SLDSVRTSRG AFAEAALAEV AAQALSGLAY LHARRIVHLD VKPGNLLVST AGEVKVADFG
201: IAKVLARAGD HCASYAGTSA YMSPERFDPE AHGGHYDPCA ADVWSLGVTL LELFMGRYPL LPAGQRPSWA ALMCAVCFGD PPVLPEGASS PELRGFVAAC
301: LRKDYRNRAS VAELLAHPFV AGRDVAASRC ALRKLVADAS SPSSDCRHT

Best Arabidopsis Sequence Match ( AT1G73500.1 )
(BLAST)

001: MALVRERRQL NLRLPLPPIS DRRFSTSSSS ATTTTVAGCN GISACDLEKL NVLGCGNGGI VYKVRHKTTS EIYALKTVNG DMDPIFTRQL MREMEILRRT
101: DSPYVVKCHG IFEKPVVGEV SILMEYMDGG TLESLRGGVT EQKLAGFAKQ ILKGLSYLHA LKIVHRDIKP ANLLLNSKNE VKIADFGVSK ILVRSLDSCN
201: SYVGTCAYMS PERFDSESSG GSSDIYAGDI WSFGLMMLEL LVGHFPLLPP GQRPDWATLM CAVCFGEPPR APEGCSEEFR SFVECCLRKD SSKRWTAPQL
301: LAHPFLREDL

Arabidopsis Description

MKK9Mitogen-activated protein kinase kinase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.