Factsheet for PGSC0003DMT400031593

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g083040.2.1	Tomato	cytosol	97.03	63.0
Solyc08g008550.2.1	Tomato	cytosol	73.73	48.88
VIT_02s0025g02480.t01	Wine grape	cytosol	68.22	44.17
TraesCS7A01G078200.1	Wheat	nucleus	44.07	41.52
KRH17577	Soybean	cytosol	61.86	40.17
KRG90101	Soybean	cytosol	59.32	39.22
Bra033169.1-P	Field mustard	cytosol	51.27	36.72
CDY25260	Canola	cytosol	51.27	36.67
CDX94250	Canola	cytosol	51.27	36.45
AT4G24100.4	Thale cress	mitochondrion	54.66	35.59
Bra013762.1-P	Field mustard	mitochondrion	51.06	35.34
AT4G10730.1	Thale cress	mitochondrion	51.91	34.46
CDY03490	Canola	mitochondrion	51.69	34.32
TraesCS1A01G181900.1	Wheat	cytosol, mitochondrion, nucleus	50.42	33.33
Os10t0518800-01	Rice	plasma membrane	51.91	33.06
TraesCS1B01G199100.2	Wheat	cytosol	50.64	33.01
GSMUA_Achr11P...	Banana	cytosol	52.33	32.98
TraesCS1D01G185000.2	Wheat	cytosol, mitochondrion, nucleus	50.85	32.83
Os03t0114300-01	Rice	mitochondrion	51.27	32.66
KXG38178	Sorghum	cytosol	50.64	32.43
Zm00001d013836_P001	Maize	mitochondrion	50.0	32.11
HORVU1Hr1G048230.1	Barley	cytosol	49.79	31.97
KXG40349	Sorghum	mitochondrion	51.48	31.85
CDX86848	Canola	mitochondrion	45.13	31.6
Zm00001d027340_P001	Maize	mitochondrion	52.33	31.39
CDY53517	Canola	mitochondrion	44.7	31.03
Zm00001d032440_P004	Maize	mitochondrion	49.36	30.62
Bra035282.1-P	Field mustard	cytosol	37.71	30.07
HORVU4Hr1G088910.1	Barley	cytosol, mitochondrion	45.55	29.05
TraesCSU01G115300.1	Wheat	mitochondrion	44.92	28.61
TraesCS4B01G398400.3	Wheat	mitochondrion	44.7	28.36
TraesCS5A01G556400.5	Wheat	mitochondrion	44.49	28.3
TraesCS4B01G395600.1	Wheat	nucleus	32.63	24.48
GSMUA_Achr8P11800_001	Banana	mitochondrion	21.4	23.43
PGSC0003DMT400036874	Potato	cytosol	24.36	17.14
PGSC0003DMT400042095	Potato	cytosol	12.08	10.9
PGSC0003DMT400074400	Potato	cytosol	8.26	10.46
PGSC0003DMT400039329	Potato	cytosol	6.14	5.63
PGSC0003DMT400023739	Potato	plastid	3.81	4.86
PGSC0003DMT400014637	Potato	cytosol	3.6	4.8
PGSC0003DMT400083995	Potato	cytosol	2.33	3.3
PGSC0003DMT400000744	Potato	cytosol	2.33	3.08
CDY03491	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400031593	EnsemblPlantsGene:PGSC0003DMG400012121	InterPro:Kinase-like_dom_sf	ncoils:Coil	PANTHER:PTHR24361	PANTHER:PTHR24361:SF615
PGSC:PGSC0003DMG400012121	SEG:seg	SUPFAM:SSF56112	UniParc:UPI0002966B43	UniProt:M1AVW2	MapMan:35.2

Description

Serine/threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400012121]

Coordinates

chr8:-:56564642..56570250

Molecular Weight (calculated)

52428.2 Da

IEP (calculated)

8.055

GRAVY (calculated)

-0.708

Length

472 amino acids

Sequence
(BLAST)

001: MVAMCLVKDQ TKRPTAEKLL KHSFFKNAKP PELSVKKLFA DLPPLWNRVK ALQLKDAAQL ALKRMPSSEQ EALSQSEYQR GVSAWNFDLE DLKLQASLVQ
101: DDDEIQEIKE DDDTMKAYMN YKEKSVALQY AGKSTPRKDS IASEQESVGE VPVAEYEIKK GKDLESSTPD SDHWEKNGLK RNASKTELPP LTSERDALLA
201: RSRTQTTKAR QSQSGPLMAG TVLSHSASER VRSSERSEIE NQQPGDKAHP VRRAPSFSGP LMLPNRASGN SLSAPIKSSG GFKDSLDDKS KPNLVQIKGR
301: FSVTSENVDL VKDIPLCTVP RRSSQGSPLR KSASVGEWLI ESKQMPPSQP PKELGLNNVP ASVLMPHLQN LFQQTSIQQD LIVNLLSSLQ LSEAGDSSQN
401: GKLSPLQRPE NNGIVEAAVS EREKLLLVKI SELQARMINL TDELTAEKLK YWQLQQRMSS CGEDGDRREL ES

Best Arabidopsis Sequence Match ( AT4G24100.1 )
(BLAST)

001: MVGGGGGSSG RGGGSGSGSS KQQRGFSMNP KDYKLMEEIG HGASAVVYRA IYLPTNEVVA IKCLDLDRCN SNLDDIRRES QTMSLIDHPN VIKSFCSFSV
101: DHSLWVVMPF MAQGSCLHLM KTAYSDGFEE SAICCVLKET LKALDYLHRQ GHIHRDVKAG NILLDDNGEI KLGDFGVSAC LFDNGDRQRA RNTFVGTPCW
201: MAPEVLQPGN GYNSKADIWS FGITALELAH GHAPFSKYPP MKVLLMTIQN APPGLDYDRD KKFSKSFKEM VAMCLVKDQT KRPTAEKLLK HSCFKHTKPP
301: EQTVKILFSD LPPLWTRVKS LQDKDAQQLA LKRMATADEE AISQSEYQRG VSAWNFDVRD LKTQASLLID DDDLEESKED EEILCAQFNK VNDREQVFDS
401: LQLYENMNGK EKVSNTEVEE PTCKEKFTFV TTTSSLERMS PNSEHDIPEA KVKPLRRQSQ SGPLTSRTVL SHSASEKSHI FERSESEPQT APTVRRAPSF
501: SGPLNLSTRA SSNSLSAPIK YSGGFRDSLD DKSKANLVQK GRFSVTSGNV DLAKDVPLSI VPRRSPQATP LRKSASVGNW ILEPKMPTAQ PQTIKEHSSH
601: PTSSSPIMPQ LQHLFQQNSI QQDLIMNLLN SLQPVEATEG SQSGKLPPLP RSDSNGNVEP VASERERLLL SSISDLRARL DDLTEELDIE KSKYSQLQQK
701: LKAFTGREH

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT4G24100]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.