Factsheet for PGSC0003DMT400036874

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g117790.1.1	Tomato	cytosol	97.32	93.55
PGSC0003DMT400074400	Potato	cytosol	42.77	76.94
TraesCS6A01G353400.1	Wheat	cytosol	38.6	74.43
VIT_09s0018g01390.t01	Wine grape	cytosol	60.66	69.34
KRH44651	Soybean	cytosol	68.26	65.62
KRH47003	Soybean	cytosol	67.06	64.84
GSMUA_Achr3P04830_001	Banana	cytosol	41.28	64.72
Bra035132.1-P	Field mustard	cytosol	56.78	64.14
AT1G79640.1	Thale cress	cytosol	61.85	60.67
CDX67984	Canola	cytosol	60.51	59.62
CDX88555	Canola	cytosol	60.36	58.44
CDX79332	Canola	cytosol	60.66	58.14
Bra003600.1-P	Field mustard	cytosol	54.69	57.7
CDX87368	Canola	cytosol	60.51	57.59
GSMUA_Achr9P13450_001	Banana	cytosol	48.14	56.37
Os02t0791700-00	Rice	plasma membrane	53.65	53.25
HORVU6Hr1G084460.12	Barley	cytosol	54.55	52.51
TraesCS6B01G386100.1	Wheat	cytosol	54.1	52.23
TraesCS6D01G335800.1	Wheat	cytosol	53.95	52.09
Zm00001d018352_P001	Maize	cytosol	51.86	51.71
Zm00001d052051_P001	Maize	cytosol	52.76	51.3
EES05936	Sorghum	cytosol	52.31	51.02
GSMUA_Achr10P...	Banana	cytosol	59.46	50.38
TraesCS6A01G353500.1	Wheat	peroxisome	49.78	49.7
PGSC0003DMT400042095	Potato	cytosol	27.57	35.37
PGSC0003DMT400000744	Potato	cytosol	14.16	26.61
PGSC0003DMT400014637	Potato	cytosol	13.86	26.27
PGSC0003DMT400083995	Potato	cytosol	12.97	26.13
PGSC0003DMT400031593	Potato	nucleus	17.14	24.36
PGSC0003DMT400023739	Potato	plastid	12.97	23.51
PGSC0003DMT400039329	Potato	cytosol	14.46	18.84

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102594058	MapMan:18.4.2.3	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1B4E6	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG402014218
PGSC:PGSC0003DMG402014218	EnsemblPlants:PGSC0003DMT400036874	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF488	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00029693F3	RefSeq:XP_015161677.1	SEG:seg	:	:	:

Description

ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase [Source:PGSC_GENE;Acc:PGSC0003DMG402014218]

Coordinates

chr3:-:57410170..57417119

Molecular Weight (calculated)

74723.8 Da

IEP (calculated)

6.365

GRAVY (calculated)

-0.467

Length

671 amino acids

Sequence
(BLAST)

001: MDKKKYPIGP EHYTLFEEVG QGVSASVHRA LCISLNEVVA IKILDFERDN SDLNNISREA QTMVLVDHPN VLKSHCSFVS DHNLWVIMPY MAGGSCLHIL
101: KATHPDGFEE TVIATVLREV LKGLEYLHHH GFIHRDVKAG NILIDSRGGI KLGDFGVSAY LFDSGDRQRM RNTFVGTPCW MAPEVMEQLH GYDFKADIWS
201: FGITALELAH GHAPFSKYPP MKVLLMTLQN APPGLDYERD KKFSKSFKQM IASCLVKDPS KRPSAKKLLK HPFFKQARSN DYIGRTLLEG LPALGDRMKA
301: LKRKEEDMLA QKKIPDGQKE EISQNEYKRG ISSWNFNLED LKAQATLIPD EEILGDKDLG GSSNSLSGLD IPGKQLNKFQ HQFSFSSQYS DATEFDSNNP
401: SAPPSPATQN VAYNITKCEK SDDDLSIAGS FHDPQLSQNS SPCYDNRMEL NLVGKGEQVA DAKLFEGMPV NSRQSDKSQF QNVSSCNGTS VLQTIDDVPT
501: EVISKHCRTS ASSEDFDEKT KGHVVQQRGR FKVTSENVDL EKVGASPMLH KSQSLLVMPQ TLAAAQPLPL DATPPNLLTP SHFPALQSIL EANILQRESI
601: LRLMRQVALG DTAVDAGCMP LNSLGVEKSL LEVAHDKEKE LISENTELQW RLIRAQEELQ KYKAENAQNN S

Best Arabidopsis Sequence Match ( AT1G79640.1 )
(BLAST)

001: MEKKKYPIGP EHYTLYEFIG QGVSALVHRA LCIPFDEVVA IKILDFERDN CDLNNISREA QTMMLVDHPN VLKSHCSFVS DHNLWVIMPY MSGGSCLHIL
101: KAAYPDGFEE AIIATILREA LKGLDYLHQH GHIHRDVKAG NILLGARGAV KLGDFGVSAC LFDSGDRQRT RNTFVGTPCW MAPEVMEQLH GYDFKADIWS
201: FGITGLELAH GHAPFSKYPP MKVLLMTLQN APPGLDYERD KKFSRSFKQM IASCLVKDPS KRPSAKKLLK HSFFKQARSS DYIARKLLDG LPDLVNRVQA
301: IKRKEEDMLA QEKMADGEKE ELSQNEYKRG ISGWNFNLDD MKAQASLIQD MDCGFSDSLS GSATSLQALD SQDTQSEIQE DTGQITNKYL QPLIHRSLSI
401: ARDKSDDDSS LASPSYDSYV YSSPRHEDLS LNNTHVGSTH ANNGKPTDAT SIPTNQPTEI IAGSSVLADG NGAPNKGESD KTQEQLQNGS NCNGTHPTVG
501: GDDVPTEMAV KPPKAASSLD ESDDKSKPPV VQQRGRFKVT SENLDIEKVV APSPILQKSH SMQVLCQHSS ASLPHSDVTL PNLTSSYVYP LVYPVLQTNI
601: LERDNILHMM KVLTNRELTD GRAVEQGSIQ QPTVPPTEKS MLEAAHEREK ELLHDITDLQ WRLICAEEEL QKYKTEHAQV SMSN

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT1G79640]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.