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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67813
CDX68224
CDX71876
CDX77690
CDX79256
CDX79596
CDX79952
CDX82067
CDX84225
CDX84616
CDX87454
CDX87678
CDX88437
CDX89033
CDX89034
CDX90141
CDX94599
CDX96246
CDX96247
CDX98395
CDY05979
CDY05980
CDY11103
CDY14349
CDY14617
CDY15683
CDY22506
CDY23869
CDY26860
CDY31674
CDY35426
CDY35728
CDY37148
CDY45782
CDY58504
CDY65903
CDY71921

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G59790.1 CDX90141 AT1G28280.1 24750137
AT3G59790.1 CDX94599 AT1G28280.1 24750137
AT3G59790.1 CDY15683 AT1G28280.1 24750137
AT3G59790.1 CDY35728 AT1G28280.1 24750137
AT3G59790.1 CDX68224 AT1G73500.1 19513235
AT3G59790.1 CDX82067 AT1G73500.1 19513235
AT3G59790.1 CDY11103 AT1G73500.1 19513235
AT3G59790.1 CDY71921 AT1G73500.1 19513235
AT3G59790.1 CDX79256 AT1G78310.1 24750137
AT3G59790.1 CDX87454 AT1G78310.1 24750137
AT3G59790.1 CDX88437 AT1G78310.1 24750137
AT3G59790.1 CDY14617 AT1G78310.1 24750137
AT3G59790.1 CDY26860 AT1G78310.1 24750137
AT3G59790.1 CDX79596 AT2G35230.1 24750137
AT3G59790.1 CDX84225 AT2G35230.1 24750137
AT3G59790.1 CDX84616 AT2G35230.1 24750137
AT3G59790.1 CDY31674 AT2G35230.1 24750137
AT3G59790.1 CDX79952 AT2G41180.1 24750137
AT3G59790.1 CDY22506 AT2G41180.1 24750137
AT3G59790.1 CDY23869 AT2G41180.1 24750137
AT3G59790.1 CDY35426 AT2G41180.1 24750137
AT3G59790.1 CDX67813 AT3G59790.1 19513235
AT3G59790.1 CDX71876 AT3G59790.1 19513235
AT3G59790.1 CDX89033 AT3G59790.1 19513235
AT3G59790.1 CDX89034 AT3G59790.1 19513235
AT3G59790.1 CDX98395 AT3G59790.1 19513235
AT3G59790.1 CDY05979 AT3G59790.1 19513235
AT3G59790.1 CDY05980 AT3G59790.1 19513235
AT3G59790.1 CDY45782 AT3G59790.1 19513235
AT3G59790.1 CDX77690 AT5G46780.1 24750137
AT3G59790.1 CDX87678 AT5G46780.1 24750137
AT3G59790.1 CDY37148 AT5G46780.1 24750137
AT3G59790.1 CDY58504 AT5G46780.1 24750137
AT3G59790.1 CDX96246 AT5G53830.1 24750137
AT3G59790.1 CDX96247 AT5G53830.1 24750137
AT3G59790.1 CDY14349 AT5G53830.1 24750137
AT3G59790.1 CDY65903 AT5G53830.1 24750137
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014527.1-P Field mustard cytosol 98.73 98.98
CDY45782 Canola cytosol 94.42 95.14
CDX89033 Canola cytosol 83.25 84.1
KRH71277 Soybean nucleus 64.47 64.96
HORVU7Hr1G023760.2 Barley cytosol 60.41 64.85
CDY05980 Canola cytosol 63.96 64.78
GSMUA_Achr2P19320_001 Banana cytosol 62.18 64.64
GSMUA_Achr10P... Banana cytosol 62.44 64.4
AT3G59790.1 Thale cress cytosol 64.21 64.38
Solyc08g014420.2.1 Tomato cytosol 64.21 64.21
CDY17911 Canola cytosol 63.71 64.03
CDX79801 Canola cytosol 63.71 64.03
GSMUA_Achr5P06640_001 Banana cytosol 61.93 63.87
Solyc12g019460.1.1 Tomato cytosol 63.71 63.38
VIT_05s0094g00900.t01 Wine grape cytosol 63.96 63.32
CDY05979 Canola cytosol 63.96 63.0
CDY44256 Canola cytosol 62.94 62.78
CDX83459 Canola cytosol 62.94 62.78
CDX71876 Canola cytosol 63.45 62.66
CDX99153 Canola cytosol 52.03 61.56
Os06t0154500-01 Rice plasma membrane 62.18 61.56
Zm00001d036215_P003 Maize cytosol, extracellular 62.18 61.56
EER89222 Sorghum cytosol 62.44 61.19
TraesCS7B01G009200.1 Wheat nucleus 60.66 60.81
Zm00001d045310_P003 Maize cytosol 61.17 60.55
TraesCS7A01G111300.1 Wheat golgi 60.66 60.35
TraesCS7D01G106400.1 Wheat cytosol 60.15 60.31
CDX86029 Canola cytosol 56.09 59.73
CDX74352 Canola cytosol 56.35 59.52
CDX91889 Canola cytosol 56.35 59.52
CDY22716 Canola cytosol 55.58 59.03
CDY06283 Canola cytosol 55.58 59.03
CDY13253 Canola cytosol 55.84 58.98
KRH50176 Soybean cytosol, nucleus 63.71 57.97
CDX74788 Canola cytosol 52.03 56.94
CDY18876 Canola cytosol 51.78 56.67
CDY37087 Canola cytosol 51.52 56.39
CDY27334 Canola cytosol 51.27 56.11
CDX67813 Canola cytosol 62.69 54.77
CDX98395 Canola cytosol 62.69 52.22
CDX93447 Canola cytosol 45.69 48.78
CDX94915 Canola cytosol 45.69 48.78
CDY44551 Canola cytosol 45.69 48.65
CDY45885 Canola cytosol 44.92 47.84
CDY46308 Canola cytosol 44.16 47.28
CDX86793 Canola cytosol 56.09 47.22
CDY53276 Canola cytosol 43.91 41.39
CDY30325 Canola endoplasmic reticulum, plasma membrane 43.91 36.97
CDX92058 Canola cytosol 28.17 36.63
CDX83865 Canola cytosol 24.37 33.57
CDX77826 Canola cytosol 39.09 31.62
CDY17674 Canola cytosol 39.09 31.62
CDY40377 Canola cytosol 39.09 31.56
CDY41084 Canola cytosol 38.83 31.42
CDX70861 Canola cytosol 42.13 29.7
CDY66706 Canola cytosol 42.13 29.7
CDY13942 Canola cytosol 41.88 29.46
CDX92566 Canola cytosol 41.88 29.41
CDY21718 Canola cytosol 40.36 27.51
CDY49620 Canola cytosol, nucleus 41.12 27.36
CDX92190 Canola plastid 41.12 27.27
CDY26184 Canola cytosol 40.1 27.19
CDX81862 Canola cytosol 40.1 27.19
CDY60775 Canola cytosol 40.1 27.05
CDX68218 Canola mitochondrion 39.34 26.91
CDY63829 Canola peroxisome 38.83 26.8
CDY24091 Canola cytosol 39.85 26.75
CDY60212 Canola cytosol 38.07 26.74
CDY25849 Canola cytosol 38.32 26.73
CDY11098 Canola mitochondrion 39.09 26.69
CDX97596 Canola cytosol 40.1 26.64
CDX98489 Canola cytosol 40.1 26.38
CDY45117 Canola cytosol 39.59 26.35
CDY32347 Canola cytosol 40.1 26.2
CDY20079 Canola cytosol 40.1 26.2
CDX79842 Canola cytosol 40.86 26.09
CDY42817 Canola cytosol 40.36 24.77
CDX83515 Canola cytosol 40.36 24.65
CDY60195 Canola cytosol 40.86 24.51
Protein Annotations
KEGG:04150+2.7.11.24Gene3D:1.10.510.10MapMan:18.4.3.6Gene3D:3.30.200.20GO:A0A078DK82EnsemblPlants:CDX89034
ProteinID:CDX89034ProteinID:CDX89034.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004707GO:GO:0004871GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00149153001InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:MAP_kinase_CS
PFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108ScanProsite:PS01351PFscan:PS50011
PANTHER:PTHR24055PANTHER:PTHR24055:SF214InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EEA8B3SEG:seg:::
Description
BnaA04g01520D
Coordinates
chrLK031857:+:668241..670180
Molecular Weight (calculated)
45575.7 Da
IEP (calculated)
5.613
GRAVY (calculated)
-0.354
Length
394 amino acids
Sequence
(BLAST)
001: MEPTNDAHEM VETNARATTD AQLYPPPEVL AVDENITANP SHDGRYIQYN IRDNIIELTA KYKPPIMPIG RGAYGFVCSA TNWETNEKVA IKKIDQAFEN
101: KIKAKRTLRE IKLLRHFKHE NIIGIKDLIL PPQRDAFEDV YIAFELMETD LHNIITSGQE LEPLHYEVFL YQILCGLKYI HSANVLHRDL KPSNLLVNEN
201: CKLKICDFGL ARGTSEHNAM TEYVVTRWYR APELLLNSSA YTSAIDIWSV GCIFLELLTR KTVFRGRDTV TKKKKIHFDL QLLGSPSEEE LGSLSENAKL
301: YLRQLPNHDR QSFFVVFPNV PYPALDLIMK MLKFDPRQRI SVEDALDHPY LREMHDFTNE PVCMTPFNFD LEEQPLTEEE IKELIYREAL AFSP
Best Arabidopsis Sequence Match ( AT1G07880.2 )
(BLAST)
001: MEKREDGGIL TYDGRYVMYN VLGNIFELSS KYIPPIEPIG RGAYGIVCCA TNSETNEEVA IKKIANAFDN RVDAKRTLRE IKLLSHMDHD NVIKIKDIIE
101: LPEKERFEDV YIVYELMDTD LHQIIRSTQT LTDDHCQYFL YQILRGLKYI HSANVLHRDL KPSNLVLNTN CDLKICDFGL ARTSNETEIM TEYVVTRWYR
201: APELLLNSSE YTGAIDIWSV GCIFMEILRR ETLFPGKDYV QQLKLITELL GSPDDSDLDF LRSDNARKYV KQLPHVQKQS FREKFPNISP MALDLAEKML
301: VFDPSKRITV DEALKQPYLA SLHEINEEPT CPTPFSFDFE ETALDEQDIK ELVWRESLHF KNM
Arabidopsis Description
MPK13Mitogen-activated protein kinase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQQ9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.