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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70254
CDX73678
CDX77841
CDX80384
CDX80907
CDX88046
CDX92401
CDX95314
CDY23174
CDY30932
CDY41394
CDY67472

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G53510.1 CDX77841 AT3G44720.1 21798944
AT1G53510.1 CDY30932 AT3G44720.1 21798944
AT1G53510.1 CDX73678 AT3G51920.1 17360592
AT1G53510.1 CDX95314 AT3G51920.1 17360592
AT1G53510.1 CDY23174 AT3G51920.1 17360592
AT1G53510.1 CDX70254 AT5G04170.1 21798944
AT1G53510.1 CDX80907 AT5G04170.1 21798944
AT1G53510.1 CDY41394 AT5G04170.1 21798944
AT1G53510.1 CDY67472 AT5G04170.1 21798944
AT1G53510.1 CDX92401 AT5G21274.1 17360592
AT1G53510.1 CDX80384 AT5G23720.1 19392697
AT1G53510.1 CDX88046 AT5G23720.1 19392697
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY24091 Canola cytosol 94.59 95.4
CDY60212 Canola cytosol 84.29 88.95
CDY25849 Canola cytosol 84.29 88.32
AT1G53510.1 Thale cress cytosol 89.02 85.69
KRH21856 Soybean cytosol 62.16 80.0
CDY32347 Canola cytosol 79.56 78.11
CDY20079 Canola cytosol 79.56 78.11
CDX98489 Canola cytosol 78.89 77.96
CDX97596 Canola cytosol 78.04 77.91
KRH13458 Soybean cytosol 72.47 70.68
Solyc07g062080.2.1 Tomato cytosol 70.61 69.67
PGSC0003DMT400018188 Potato cytosol 70.61 69.32
CDX92058 Canola cytosol 35.14 68.65
VIT_19s0014g00220.t01 Wine grape cytosol 68.58 67.89
PGSC0003DMT400054750 Potato cytosol 64.86 64.76
Solyc10g007500.2.1 Tomato cytosol 64.02 63.91
CDY17674 Canola cytosol 48.99 59.55
CDX79842 Canola cytosol 61.99 59.48
CDX77826 Canola cytosol 48.82 59.34
CDY13942 Canola cytosol 56.08 59.29
CDY40377 Canola cytosol 48.82 59.22
CDX92566 Canola cytosol 56.08 59.18
CDY41084 Canola cytosol 48.65 59.14
CDX70861 Canola cytosol 55.57 58.86
CDY66706 Canola cytosol 55.41 58.68
CDY42817 Canola cytosol 60.98 56.23
CDY60195 Canola cytosol 62.16 56.01
CDX83515 Canola cytosol 60.81 55.81
CDX83865 Canola cytosol 26.86 55.59
CDY26184 Canola cytosol 52.2 53.18
CDY60775 Canola cytosol 52.03 52.74
CDX92190 Canola plastid 52.87 52.69
CDY21718 Canola cytosol 51.35 52.6
CDY49620 Canola cytosol, nucleus 52.53 52.53
CDX81862 Canola cytosol 51.52 52.5
CDX68218 Canola mitochondrion 50.84 52.26
CDY11098 Canola mitochondrion 50.84 52.17
CDY63829 Canola peroxisome 48.82 50.61
CDX99153 Canola cytosol 26.69 47.45
CDX91889 Canola cytosol 28.38 45.04
CDX74352 Canola cytosol 28.38 45.04
CDX86029 Canola cytosol 28.04 44.86
CDY13253 Canola cytosol 28.21 44.77
CDY22716 Canola cytosol 28.04 44.74
CDY06283 Canola cytosol 27.7 44.2
CDX74788 Canola cytosol 26.18 43.06
CDY27334 Canola cytosol 26.18 43.06
CDY18876 Canola cytosol 26.18 43.06
CDY45885 Canola cytosol 26.86 42.97
CDY17911 Canola cytosol 28.38 42.86
CDX79801 Canola cytosol 28.38 42.86
CDX93447 Canola cytosol 26.69 42.82
CDY37087 Canola cytosol 26.01 42.78
CDY44551 Canola cytosol 26.69 42.7
CDY46308 Canola cytosol 26.52 42.66
CDX94915 Canola cytosol 26.52 42.55
CDX83459 Canola cytosol 28.21 42.28
CDY44256 Canola cytosol 28.21 42.28
CDY05980 Canola cytosol 27.53 41.9
CDY05979 Canola cytosol 28.04 41.5
CDY45782 Canola cytosol 27.03 40.92
CDX71876 Canola cytosol 27.36 40.6
CDX89033 Canola cytosol 26.69 40.51
CDX89034 Canola cytosol 26.35 39.59
CDY53276 Canola cytosol 27.2 38.52
CDX86793 Canola cytosol 28.72 36.32
CDX67813 Canola cytosol 27.53 36.14
CDX98395 Canola cytosol 27.53 34.46
CDY30325 Canola endoplasmic reticulum, plasma membrane 27.2 34.4
Protein Annotations
KEGG:04150+2.7.11.24Gene3D:1.10.510.10MapMan:18.4.3.6Gene3D:3.30.200.20GO:A0A078I510UniProt:A0A078I510
EnsemblPlants:CDY45117ProteinID:CDY45117ProteinID:CDY45117.1GO:GO:0000165GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004707GO:GO:0004871GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006464GO:GO:0006468
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00081404001InterPro:IPR000719InterPro:Kinase-like_dom_sf
InterPro:MAP_kinase_CSPFAM:PF00069ScanProsite:PS00107ScanProsite:PS01351PFscan:PS50011PANTHER:PTHR24055
PANTHER:PTHR24055:SF200InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112UniParc:UPI0004EE43BD
SEG:seg:::::
Description
BnaC06g06380DMitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A078I510]
Coordinates
chrLK032614:-:53835..57132
Molecular Weight (calculated)
66626.5 Da
IEP (calculated)
9.788
GRAVY (calculated)
-0.477
Length
592 amino acids
Sequence
(BLAST)
001: MQQNQVKKDA KEMDFFTEYG DANRYRILEV IGKGSYGVVC AAVDTHTGEK VAIKKINNVF EHISDALRML REVKLLRLLR HPDIVEIKSI LLPPSKREFR
101: DIYVVFELME SDLHQVIKAN DDLTKEHHQF FLYQMLRALK FMHTANVYHR DLKPKNILAN ANCKLKVCDF GLARVAFNDT PTTVFWTDYV ATRWYRAPEL
201: CGSFFSKYTP AIDIWSIGCI FAEVLTGKPL FPGKSVAHQL ELITDLLGSP KSETISGVRN DKARKYLSEM RKKDPVTFSQ KFSKADPLAV RLLQRLLAFD
301: PKDRPTAAEA LADPYFKGLS KVEREPSCQP ISKMEFEFER RRLTKDDIRE LIYREILEYH PQLLKDYMSG SEGSSFVYPS AIGHLRKQFN YLEENSSRNG
401: PVIPPERKHV SLPRSAVHSS AVHSTSQPNL CATESRRVHF EQPSRNGAVS STRALGPPPR VPPSSGRSGR VVEPSASYEN GRNLKEAYFR STVSSPHSSS
501: QPKPQKFVHQ YSPTVPPPAA RTNQPNVEIV NRPNPYFQSQ LPKTDQSSNN TQMAIDATLL QAQSQFGPAG AAAVAVAAHR NVGTVSYGAA AS
Best Arabidopsis Sequence Match ( AT1G53510.1 )
(BLAST)
001: MQQNQVKKGT KEMEFFTEYG DANRYRILEV IGKGSYGVVC AAIDTHTGEK VAIKKINDVF EHISDALRIL REVKLLRLLR HPDIVEIKSI MLPPSKREFK
101: DIYVVFELME SDLHQVIKAN DDLTREHHQF FLYQMLRALK FMHTANVYHR DLKPKNILAN ANCKLKVCDF GLARVAFNDT PTTVFWTDYV ATRWYRAPEL
201: CGSFFSKYTP AIDVWSIGCI FAEVLTGKPL FPGKSVVHQL ELITDLLGTP KSETISGVRN DKARKYLTEM RKKNPVTFSQ KFSKADPLAL RLLQRLLAFD
301: PKDRPTPAEA LADPYFKGLS KIEREPSSQQ ISKMEFEFER RRLTKDDIRE LIYREILEYH PQLLKDYMSG SEGSNFVYPS AIGHLRQQFT YLEENSSRNG
401: PVIPLERKHA SLPRSTVHST VVHSTSQPNL GATDSRRVSF EPSKNGASSA GHPSTSAYPT KSIGPPPRVP PSGRPGRVVE SSVSYENGRN LKEAYFRSAV
501: SSPHCYFRPN TMTNPENRNI EASSFPPKPQ NPVHQFSPTE PPAATTNQAD VETMNHPNPY FQPQLPKTDQ LNNNTHMAID AKLLQAQSQF GPAGAAAVAV
601: AAHRNIGTIS YSAAS
Arabidopsis Description
MPK18Mitogen-activated protein kinase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5C0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.